Pairwise Alignments

Query, 502 a.a., gonadoliberin III from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., gonadoliberin III-related protein (RefSeq) from Shewanella loihica PV-4

 Score =  492 bits (1266), Expect = e-143
 Identities = 264/504 (52%), Positives = 351/504 (69%), Gaps = 6/504 (1%)

Query: 1   MTSKIPFYISVFLLFATGITLSVLRHQDYGVPWTPGETRQVWDIEARIEFAAQGKEAKVS 60
           M SK PFYI V LLF  GI  SV R  ++ VP+ PGE  Q W ++A++ F   G+ A+V+
Sbjct: 1   MHSKKPFYILVALLFIAGIAASVYRGIEHNVPFLPGEQVQSWAVDAKVSFQGTGEPAEVT 60

Query: 61  LAAPLTQEGYTLINETASSPGYGISYLNTESGRRIEWSIRQASGPQTIYYKAQFLVDPQA 120
            + P     + ++ E A+SPGYG+S    ++GR++ WS R+A G Q +YYK   +  P  
Sbjct: 61  FSLP-KDPAFEILAENATSPGYGLSATEDDTGRQVTWSTREAIGQQDLYYKVTLV--PTG 117

Query: 121 KAVQIPPTQPITKPAFDGP--EESAAIALIDSASQRSADHVTFARELIKGLNDSE-SQNA 177
           K       +P    A++ P  E++AA  ++     RSA +++FA++L K  N +E SQN 
Sbjct: 118 KNEIPADKEPDAPQAYNWPATEKAAAEQVMSEIWSRSATNLSFAQQLNKSFNATERSQNL 177

Query: 178 SLLLNKMSKVDATQKLLSYALVPNKVVGVIQLEDGRRRQSIQHMNEVWNGSAWILFNPET 237
            LLL   S+ +    +L+   +P K V  + LED RRRQ + +  EV++   WI+FNP  
Sbjct: 178 ELLLTSNSRAELFIHMLNSKGIPAKKVSGLFLEDQRRRQQLTNYVEVYHQGQWIIFNPND 237

Query: 238 GTQPTHPNLLVWDESNVSLLDVVGGQNSQVMFSMISQKVSPQQATDSKVEADGLLNLSIH 297
           GTQ    NLL+WD +  S LDVVGG NSQV FSM+    S    +   ++    L+ S++
Sbjct: 238 GTQGRPDNLLIWDRTAKSTLDVVGGVNSQVNFSMLQDTRSALATSIDMLKNKNALDFSLY 297

Query: 298 SLPLEEQAMFKTIMLIPIGALIVVFLRVIVGLKTSGTFMPVLIAVAFVQTQLTTGIVGFL 357
            LPLEEQ++FK I+LIPIG L+VVFLRVI+G+KTSGTFMPVLIA+AF+QT L TG+VGFL
Sbjct: 298 QLPLEEQSLFKGILLIPIGVLMVVFLRVIIGIKTSGTFMPVLIALAFIQTTLLTGLVGFL 357

Query: 358 LIVGTGLIIRSYLSKLNLLLVARISAVIITVILIISVFTVVAFKVGLTEGLTITFFPMII 417
           LIV  GL+IRSYLS LNLLL++RISAVII VI II +FT++++K GL+EGLTITFFPMII
Sbjct: 358 LIVAFGLMIRSYLSDLNLLLISRISAVIIVVIGIIGLFTLLSYKFGLSEGLTITFFPMII 417

Query: 418 LSWTIERMSILWEEEGAKEVLLQGGGSLFTAILIYLAMTNTYVQHLTFNFIGLQLVVLAA 477
           L+WTIERMSILWEEEGAKEV++QGGGSLF A L YLAM+ T+VQH  FNF+G+ LV+LA 
Sbjct: 418 LAWTIERMSILWEEEGAKEVMVQGGGSLFVATLAYLAMSATWVQHWVFNFLGIHLVILAT 477

Query: 478 ILLLGTYTGYRISELRRFKPLVEE 501
           +LL+G YTGY++ ELRRF+PL  E
Sbjct: 478 VLLMGQYTGYKLLELRRFRPLAGE 501