Pairwise Alignments

Query, 502 a.a., gonadoliberin III from Vibrio cholerae E7946 ATCC 55056

Subject, 502 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score =  469 bits (1206), Expect = e-136
 Identities = 257/502 (51%), Positives = 345/502 (68%), Gaps = 8/502 (1%)

Query: 1   MTSKIPFYISVFLLFATGITLSVLRHQDYGVPWTPGETRQVWDIEARIEFAAQGKEAKVS 60
           M S+ PFYI V LLF  G++ S+ R   + VP+ PGE  Q W ++A+I F   G  A+VS
Sbjct: 1   MHSRKPFYILVALLFIIGLSASIYRGVKHQVPFLPGEQVQSWAVDAKISFDGTGDAAEVS 60

Query: 61  LAAPLTQEGYTLINETASSPGYGISYLNTESGRRIEWSIRQASGPQTIYYKAQFLVD--P 118
            + P     Y ++ E ASSPG+G+S  + +  RR  WSIR+A G Q +YYK   +     
Sbjct: 61  FSLP-QDPAYEVLVENASSPGFGLSVSDDKDARRAIWSIREAYGSQDLYYKVTLVPTGVT 119

Query: 119 QAKAVQIPPT-QPITKPAFDGPEESAAIALIDSASQRSADHVTFARELIKGLNDSE-SQN 176
           Q  +  IP   +P   PA    E++AA  +I+    RSA +++FA++L+  +  ++ SQN
Sbjct: 120 QIHSDNIPSQPEPYLWPA---TEKTAAEQVINETWTRSASNLSFAQQLMNAITATKRSQN 176

Query: 177 ASLLLNKMSKVDATQKLLSYALVPNKVVGVIQLEDGRRRQSIQHMNEVWNGSAWILFNPE 236
             LLL+  +       +L    +P + V  + LED RRRQS+    EV++   W+LF+  
Sbjct: 177 MELLLSSQTATQVFLHMLQTKGIPAREVSGLYLEDQRRRQSLSPFVEVFHNGEWVLFDLV 236

Query: 237 TGTQPTHPNLLVWDESNVSLLDVVGGQNSQVMFSMISQKVSPQQATDSKVEADGLLNLSI 296
            G Q    NLL+W+ S  S+LDV+GG NSQV FSM+    S    +   +  +  L+ S+
Sbjct: 237 KGKQGRPENLLLWERSGHSVLDVMGGVNSQVHFSMLQDTRSALATSIDMMMNNNALDFSL 296

Query: 297 HSLPLEEQAMFKTIMLIPIGALIVVFLRVIVGLKTSGTFMPVLIAVAFVQTQLTTGIVGF 356
           + LPLEEQ++FK I+LIPIG L+VVFLRVI+G+KTSGTFMPVLIA+AF+QT L TG+VGF
Sbjct: 297 YQLPLEEQSLFKGILLIPIGVLMVVFLRVIIGVKTSGTFMPVLIALAFIQTSLVTGLVGF 356

Query: 357 LLIVGTGLIIRSYLSKLNLLLVARISAVIITVILIISVFTVVAFKVGLTEGLTITFFPMI 416
           LLIV  GL+IRSYLS+LNLLL++RISAVII VI II VFT++++K GL+EGLTITFFPMI
Sbjct: 357 LLIVACGLMIRSYLSQLNLLLISRISAVIIVVIGIIGVFTLLSYKFGLSEGLTITFFPMI 416

Query: 417 ILSWTIERMSILWEEEGAKEVLLQGGGSLFTAILIYLAMTNTYVQHLTFNFIGLQLVVLA 476
           IL+WTIERMSILWEEEG KEV++QGGGSL  A L YLAM+ ++VQH  FNF+G+ LV+LA
Sbjct: 417 ILAWTIERMSILWEEEGPKEVIVQGGGSLMVATLAYLAMSASWVQHWVFNFLGIHLVILA 476

Query: 477 AILLLGTYTGYRISELRRFKPL 498
            +LL+G YTGYR+ EL+RFKPL
Sbjct: 477 LVLLMGQYTGYRLLELKRFKPL 498