Pairwise Alignments

Query, 651 a.a., ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 984 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score = 73.9 bits (180), Expect = 3e-17
 Identities = 58/183 (31%), Positives = 94/183 (51%), Gaps = 17/183 (9%)

Query: 471 QRIADMVKSLKGYARPDDETYRLSDIH--EGIEDTLVIFENRLKRHSVEKEYAQL----P 524
           +R++ +V+SL  +A   +  ++L  +   +  +D + +    L R+  E ++  L     
Sbjct: 804 KRVSRIVQSLMSFAHAGERQHQLYPVSLAQVTQDAIGLLS--LNRNRTEVQFINLCHPDH 861

Query: 525 LIYCLPIALQQVWTNLISNAIDAFPEHGVLRIETEQQRRQDIDYAVIRFTDNGCGIPQAL 584
           +    P  L QV  NL+SNA DA P+ GV+RI +E    +   Y V+   D G GIP+ +
Sbjct: 862 VAEGDPQRLAQVLINLLSNARDASPQGGVIRISSEV--AEQTVYLVVE--DEGSGIPKDI 917

Query: 585 QQKIFALNYTTKREGNFGLGIGLSVCQQIIMQHQGWIDVDS----QPNHYTTMTVWLPLM 640
           Q ++F   +TTK  G  G G+GL++   II +H G ID+DS    +    T   + LP  
Sbjct: 918 QDRLFEPFFTTKDPGE-GTGLGLALVYSIIEEHYGQIDIDSPADPETQRGTRFRITLPRH 976

Query: 641 VSA 643
           V A
Sbjct: 977 VEA 979



 Score = 41.2 bits (95), Expect = 2e-07
 Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 6/85 (7%)

Query: 318 LQKTLESLESAHQQLMEREKMAMLGQLVAGVAHELNNPVAAILRGTETLSSHIGHLIEGE 377
           L + L   +    +L+  E++A +G+L AGVAHE+ NP+  I    + L        E E
Sbjct: 734 LVEDLTETQQLEDRLVHSERLASIGRLAAGVAHEIGNPITGIACLAQNLRD------ERE 787

Query: 378 ERAPTEQLGAQLLQKAMQAKPISTS 402
           +     ++ AQ++++  +   I  S
Sbjct: 788 DDGEIVEISAQIIEQTKRVSRIVQS 812