Pairwise Alignments

Query, 651 a.a., ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 671 a.a., PAS domain S-box from Pseudomonas stutzeri RCH2

 Score = 89.7 bits (221), Expect = 4e-22
 Identities = 85/312 (27%), Positives = 140/312 (44%), Gaps = 53/312 (16%)

Query: 330 QQLMEREKMAMLGQLVAGVAHELNNPVAAILRGTETLSSHIGHLIEGEERAPTEQLGAQL 389
           + +++ EKM  +G L AG+AHE+NNP+ AIL   + +   +   +E   R   E+ G +L
Sbjct: 402 EMMVQSEKMLSVGSLAAGMAHEINNPLGAILHNAQNIRRRLSPELE-RNREAAEETGVRL 460

Query: 390 LQKAMQAKPISTSEERHKAKQLEELIHHRLIAKKMVKLGLDDDEAMIQLAKSRPEIAQKQ 449
                  + ++   +R +  QL + I                     ++       ++  
Sbjct: 461 -------EAVNQYLQRREVPQLLDGIQQA-------------GSRAAKIVSHMLSFSRMS 500

Query: 450 LEQLESYHLTGSTLRSIQVCAQRIADMVKSLKGYARPDDETYRLSDIHEGIEDTLVIFEN 509
             QL   HL     +++++     A M    +G+       ++  DI   + D    F+ 
Sbjct: 501 NRQLADCHLPVLIDQALEIAGNDFALM----EGF------DFKAIDI---VRD----FDP 543

Query: 510 RLKRHSVEKEYAQLPLIYCLPIALQQVWTNLISNAIDAFPEHGVLRI-ETEQQRRQDIDY 568
           R+ R            + C+   L+QV  NL+ NA  A   H V    +   + R +  +
Sbjct: 544 RVDR------------VPCIGNELEQVLLNLLKNAAQAIHAHQVGEPGQIILRTRLNPPW 591

Query: 569 AVIRFTDNGCGIPQALQQKIFALNYTTKREGNFGLGIGLSVCQQIIM-QHQGWIDVDSQP 627
           A I+  DNG GIP+ ++++IF   +TTK  G  G G+GLSV   II   HQG ++V  QP
Sbjct: 592 AEIQVEDNGGGIPENVRKRIFEPFFTTKEVGQ-GTGLGLSVSYFIITNNHQGQMEVQCQP 650

Query: 628 NHYTTMTVWLPL 639
            H TT T+ LPL
Sbjct: 651 GHGTTFTLRLPL 662