Pairwise Alignments

Query, 651 a.a., ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 662 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 75.5 bits (184), Expect = 7e-18
 Identities = 68/251 (27%), Positives = 112/251 (44%), Gaps = 22/251 (8%)

Query: 404 ERHKAKQLEELIHHRLI-AKKMVKLGLDDDEAMIQLAKSRPEIAQKQ---LEQLESYHLT 459
           ER KA+ L+     +L    ++V +G        +L +    IA      L +LE+   T
Sbjct: 416 ERKKAQALQRQQQEKLEQTARLVTMGEMASTLAHELNQPLSAIASYTTGCLNRLEAGDYT 475

Query: 460 ----GSTLRSIQVCAQRIADMVKSLKGYARPDDETYRLSDIHEGIEDTLVIFENRLKR-- 513
                  L  + + AQR   +++ +  + R  +    +  + E IED++   E   ++  
Sbjct: 476 REEISGALNKLALQAQRAGRIIRRVHDFVRRREPQRVICHLEEVIEDSIAFIEPLARKQQ 535

Query: 514 -HSVEKEYAQLPLIYCLPIALQQVWTNLISNAIDAF----PEHGVLRIETEQQRRQDIDY 568
            H +    A LP +   P+ L QV  NL+ N IDA     PE   L +E +       D 
Sbjct: 536 VHMLRLVPAHLPKLLADPVLLGQVLINLMRNGIDAMAATPPERRQLIVEAQLLG----DQ 591

Query: 569 AVIRFTDNGCGIPQALQQKIFALNYTTKREGNFGLGIGLSVCQQIIMQHQGWIDVDSQPN 628
             +   D GCGIP  + +K+F+  +TTK E   G+G+GL++C+ +I  H G +  +    
Sbjct: 592 VEVCIADRGCGIPPEVAEKLFSPFFTTKTE---GMGMGLNICRSVIEFHGGRLWFEPGAE 648

Query: 629 HYTTMTVWLPL 639
             T     LPL
Sbjct: 649 GGTVFIFTLPL 659



 Score = 33.1 bits (74), Expect = 4e-05
 Identities = 28/119 (23%), Positives = 58/119 (48%), Gaps = 9/119 (7%)

Query: 283 AKVMHNDTSLLPLF---TNLLLRHFNRRLQRSITTKLELQKTLESLESAHQQLMERE-KM 338
           A + H D  ++      T L+  H  +    S    +  +K  ++L+   Q+ +E+  ++
Sbjct: 378 ASIRHRDGHIVHTMVYATPLIDAHGKQTGWISSVVDISERKKAQALQRQQQEKLEQTARL 437

Query: 339 AMLGQLVAGVAHELNNPVAAILRGTETLSSHIGHLIEGEERAPTEQLGAQLLQKAMQAK 397
             +G++ + +AHELN P++AI   T   +  +  L  G+     E++   L + A+QA+
Sbjct: 438 VTMGEMASTLAHELNQPLSAIASYT---TGCLNRLEAGD--YTREEISGALNKLALQAQ 491