Pairwise Alignments

Query, 651 a.a., ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 429 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  128 bits (322), Expect = 5e-34
 Identities = 99/339 (29%), Positives = 159/339 (46%), Gaps = 59/339 (17%)

Query: 309 QRSITTKLELQKTLESL-----ESAHQQLMEREKMAMLGQLVAGVAHELNNPVAAILRGT 363
           Q+ ++ +LE + T  SL     E+A  QL++ EKM  +GQL AGVAHE+NNP+  +    
Sbjct: 137 QKCLSEQLEQEHTALSLLNKKLEAAQNQLLQSEKMVAIGQLAAGVAHEINNPIGFVNSNL 196

Query: 364 ETLSSHIGHLIEGEERAPTEQLGAQLLQKAMQAKPISTSEERHKAKQLEELIHHRLIAKK 423
           ++L  +   L++            +L  K       +  ++  K  Q E +         
Sbjct: 197 QSLQDYNNKLLK------LLNFYQKLTHKIGSVPYFTLEQDMLKRYQFEFI--------- 241

Query: 424 MVKLGLDDDEAMIQLAKSRPEIAQKQLEQLESYHLTGSTLRSIQVCAQRIADMVKSLKGY 483
                              P++ ++ +E L+                 R+A +VKSLK +
Sbjct: 242 ---------------CSDLPDLIRESIEGLD-----------------RVAVIVKSLKSF 269

Query: 484 ARPDDETYRLSDIHEGIEDTLVIFENRLKRHSVEKEYAQ--LPLIYCLPIALQQVWTNLI 541
           +  D   ++ +++ EGIE+TL I  N++K  +V     Q  LP +YC P+ L QV+ NL+
Sbjct: 270 SHVDSSEWQYANVIEGIENTLKIAANQIKYKAVVLRNFQDNLPELYCQPMQLNQVFLNLL 329

Query: 542 SNAIDAFPEHGVLRIETEQQRRQDIDYAVIRFTDNGCGIPQALQQKIFALNYTTKREGNF 601
            NA  A  E G + I+       D ++ ++   D G GI  +  +KIF   YTTK  G  
Sbjct: 330 VNAAQAIEERGEISIDVS---ASDAEFIIV-IRDTGSGIAASDLRKIFEPFYTTKLVGT- 384

Query: 602 GLGIGLSVCQQIIMQHQGWIDVDSQPNHYTTMTVWLPLM 640
           G G+GLS+   I+ +H+G I V S     T  TV LP++
Sbjct: 385 GTGLGLSLSYSIVQKHKGEIKVSSVLGEGTAFTVILPIL 423