Pairwise Alignments

Query, 651 a.a., ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., sensor histidine kinase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  102 bits (253), Expect = 3e-26
 Identities = 82/323 (25%), Positives = 136/323 (42%), Gaps = 65/323 (20%)

Query: 318 LQKTLESLESAHQQLMEREKMAMLGQLVAGVAHELNNPVAAILRGTETLSSHIGHLIEGE 377
           LQ+ ++ ++   Q ++++EK+A LG + AGVAHE+NNP+A IL    +L S+   L+   
Sbjct: 40  LQQQIDLIKQQQQSMIQQEKLASLGTVAAGVAHEINNPLAYILSNVRSLISYAQDLLASM 99

Query: 378 ERAPTEQLGAQLLQKAMQAKPISTSEERHKAKQLEELIHHRLIAKKMVKLGLDDDEAMIQ 437
           +    +Q+                                              D+A +Q
Sbjct: 100 DEGDKQQI----------------------------------------------DQAKLQ 113

Query: 438 LAKSR-PEIAQKQLEQLESYHLTGSTLRSIQVCAQRIADMVKSLKGYARPDDETYRLSDI 496
             K   PE+A    + L                  RI D+V  L  +AR D     +  +
Sbjct: 114 FIKEDLPELASDTCQGL-----------------MRIKDIVNHLLFFARTDSTGKSVIQL 156

Query: 497 HEGIEDTLVIFENRLKRHSVEKEYAQLPLIYCLPIALQQVWTNLISNAIDAFPEHGVLRI 556
            + +E +L +    L    ++KE + +P+I      L QV  N+I NA  A         
Sbjct: 157 VDALEFSLKLLRPMLNNVLIKKEISHVPMILFNVGELNQVLMNIIVNAYQACDVVSDRPS 216

Query: 557 ETEQQRRQDIDYAVIRFTDNGCGIPQALQQKIFALNYTTKREGNFGLGIGLSVCQQIIMQ 616
           E   +  Q      +   DNGCG+ +    ++F   YTTK  G  G G+G+S+  QI+ Q
Sbjct: 217 EIRLKLTQSDTNICLTVVDNGCGMDEYTLGRMFDAFYTTKPVGT-GTGVGMSIVLQILRQ 275

Query: 617 HQGWIDVDSQPNHYTTMTVWLPL 639
           H   I+V S+P++ T + +  P+
Sbjct: 276 HDCTIEVKSEPDNGTEVMILFPI 298