Pairwise Alignments

Query, 311 a.a., HDOD domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 280 a.a., putative signal transduction protein (RefSeq) from Shewanella loihica PV-4

 Score = 74.7 bits (182), Expect = 2e-18
 Identities = 64/240 (26%), Positives = 116/240 (48%), Gaps = 14/240 (5%)

Query: 25  LESEFAQLVEL--SISTGKISLPPIPDVVLKIQRLCLAESTSISDVADCLIEDPGLSAIV 82
           + SE   LV L   +    + LP +P+V +++Q +     +S   VA+ + +D  +SA +
Sbjct: 1   MSSEHQLLVGLLKKLKADALVLPTLPEVAMRVQEVVSRPDSSPKQVAEIIGQDAAISARM 60

Query: 83  IRVANSVVFNRRNITCTDIVTAVSRLGILRVRDIVTAQAIEQLKYSVN--LSKECNRILL 140
           I+VANS +++ R I   +I  AV+R+G+ +++ I T+ A+EQL  S N  + +  + +  
Sbjct: 61  IKVANSAMYS-RGIKAENINAAVTRIGLTQIKAIATSVAMEQLFISTNEMVWEVMDEVWR 119

Query: 141 KSATISREMGATMLLVTQTFKCVDAKKYQYLELEKALLVGLLADIGIFCLVNEYHLYLQN 200
            S  ++    A +L  ++T K         L  +   L  L+ +IG   ++ E       
Sbjct: 120 ASIEVTSAACALLLKYSKTHKGCG------LNYDTLTLASLVHNIGALPVLTEAEANPHL 173

Query: 201 GNYLDPTIALKIFQSQCSPISQLVLRHWGFDHDFLEVACN-TELVTERQEVTYLDIARIA 259
              ++   AL   +    P+ + VL+ W F  +  EV     +L    ++VTYLD  R A
Sbjct: 174 FTSIEQLRAL--VRKMQGPLGRAVLKSWDFSPEVTEVVERWADLPYLPEQVTYLDFVRAA 231