Pairwise Alignments

Query, 311 a.a., HDOD domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 266 a.a., hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 45.4 bits (106), Expect = 1e-09
 Identities = 41/196 (20%), Positives = 82/196 (41%), Gaps = 27/196 (13%)

Query: 47  IPDVVLKIQRLCLAESTSISDVADCLIEDPGLSAIVIRVANSVVFNRRNITCTDIVTAVS 106
           +P  VL++ R          D+   + +DP LS  V+++ NS  F R     T +  A+ 
Sbjct: 21  LPSKVLELDRKLADPQFDTKDLLALIEQDPLLSVEVLKLCNSPAFKRGEREVTSLQQALV 80

Query: 107 RLGILRVRDIVTAQAIEQLK-----YSVNLSKECNRILLKSATISREMGATMLLVTQTFK 161
           +LG  ++R  VT+  + ++      Y      E  R  ++ A ++ E+            
Sbjct: 81  QLGREQLRRFVTSSLVREMLDIKPIYFRRFGAEIWRHSMQVAFLASELSEE--------- 131

Query: 162 CVDAKKYQYLELEKALLVGLLADIG---IFCLVNEYHLYLQNGNYLDPTIALKIFQSQCS 218
                     + + A L+GLL D+G   IF ++ +  +  + G   +  +  ++  ++  
Sbjct: 132 ----------DRDTAFLLGLLHDVGKLAIFKMLLDAFVQAEPGEQPNSWLFRQVMTAKSL 181

Query: 219 PISQLVLRHWGFDHDF 234
            +S L+ +HW     F
Sbjct: 182 TLSALLAKHWQLPSTF 197