Pairwise Alignments

Query, 301 a.a., DUF340 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 206 a.a., conserved hypothetical protein, putative surface protein, function unknown (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 77.0 bits (188), Expect = 3e-19
 Identities = 61/208 (29%), Positives = 105/208 (50%), Gaps = 14/208 (6%)

Query: 104 MLESAKLILVVGAGLVAGVLLNQDLHWVESASGWILFLLLFFIGIQLRNSGLSLKQILLN 163
           M  S  +I+    G + GV  N+      + S +IL+ L+  +GI +  S  +LK I+ +
Sbjct: 1   MKGSLIVIVFFCVGCIMGVF-NKFQFDTHTVSMYILYALMLQVGISI-GSNKNLKAIISH 58

Query: 164 KHG--MVIAAVIILTSWLGGVIAAWLLDM-PIYQALAMASGFGWYSLAGILV-------- 212
            H   ++I    I  + L   +A+ LL    ++  +A+ SGF +YSL+ IL+        
Sbjct: 59  LHPKMLLIPLGTITGTLLFSALASILLSQWSVFDCMAVGSGFAYYSLSSILITQFKEPTI 118

Query: 213 GDAFGPVLGGASFMIELLRELVALVLIPMLIRRKPCTA-IGYAGATAMDFTLPVIQTTGG 271
           G      LG  + +  + RE++AL+  P++ +     A I  AG  +MD  LP I    G
Sbjct: 119 GIQLATELGTIALLTNIFREMMALLGTPLIKKYFGKLAPISAAGVNSMDVLLPSISRYSG 178

Query: 272 VKCVPVAIVSGFILSLLVPVLILFFVSL 299
            + +P+AI+ G ++ + VPV + FF +L
Sbjct: 179 KEMIPIAILHGILIDISVPVFVSFFCNL 206