Pairwise Alignments

Query, 548 a.a., putative pyridoxal-dependent aspartate 1-decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., pyridoxal-dependent decarboxylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  662 bits (1709), Expect = 0.0
 Identities = 330/546 (60%), Positives = 426/546 (78%), Gaps = 5/546 (0%)

Query: 1   MVSEH-KSAQVNFDSLLKIFTVPEGPDSTLTKIDEELSRNLNHFLRKHIVAEEKPLKEIE 59
           M  +H + A  + D+LL+IFTVPE  DSTL +I+++LS +L  FL+ +I A E+PL +IE
Sbjct: 14  MTEKHLRKATASEDNLLRIFTVPEAADSTLGRIEQQLSADLAGFLQDNIAALEQPLSDIE 73

Query: 60  KDFSNAHIPEQPQFVSDHTQYLLDTLVSHSVHTASPSFIGHMTSALPYFLMPLSKIMIAL 119
             F +  +P QPQFVSD+   ++  LV+ SVHTA+PSFIGHMTSALPYFL+PLSK+M+ L
Sbjct: 74  DHFYSVEVPPQPQFVSDYVDDIMAHLVAQSVHTAAPSFIGHMTSALPYFLLPLSKLMVGL 133

Query: 120 NQNLVKIETSKAFTPLERQVLGMIHRLIYGETDHFYQQWMHSAEHSLGAFCSGGTIANIT 179
           NQNLVKIETSKAFTP+ERQVLGM+H LIYG    FYQ ++HSA H+LGAFCSGGT+ANIT
Sbjct: 134 NQNLVKIETSKAFTPMERQVLGMMHHLIYGREKDFYQGFLHSASHALGAFCSGGTVANIT 193

Query: 180 ALWVARNNALKAEGDFPGVEKAGLFKAMRHYGHEGLAILVSERGHYSLKKAADVLGIGQE 239
           ALW+ARN  LKA G+F GV + GL KA++HYG + LAILVSERGHYSL KAAD+LGIG++
Sbjct: 194 ALWIARNQLLKARGNFRGVTREGLHKALKHYGWDDLAILVSERGHYSLGKAADLLGIGRD 253

Query: 240 GLVAVKTDAHNRICPHDLEQKITELKANKIKVFAVVGVAGTTETGNIDPLRTIAQICQRE 299
            +++V  DAHN++    +     +L+A  I+V A+VGVAGTTETGN+DPL  +A + +  
Sbjct: 254 NIISVPVDAHNKVDIDAMRVAAAQLQARNIRVMAIVGVAGTTETGNVDPLAEMAALAKEI 313

Query: 300 QIHFHIDAAWGGATLMSNRYRGLLDGVELADSVTIDAHKQLYIPMGAGMVLFKDPNAMRS 359
             HFH+DAAWGGATL+S +YR LL G+ELADSVTIDAHKQ+Y+PMGAGMVLFK+P+   +
Sbjct: 314 DCHFHVDAAWGGATLLSEKYRYLLSGIELADSVTIDAHKQMYVPMGAGMVLFKNPSFASA 373

Query: 360 IEHHAQYILRQGSKDLGSHTLEGSRSGMAMLVYASMHIISRPGYQLLIDQSIEKARYFAD 419
           IEHHA+YILRQGSKDLGS TLEGSR GMAMLV+A ++II R GY++LI+ S+E+AR+FA 
Sbjct: 374 IEHHAEYILRQGSKDLGSQTLEGSRPGMAMLVHACLNIIGREGYEILINGSLERARFFAG 433

Query: 420 LIDAQTDFELVSQPELCLLTYRYLPEHVRMALEKSQGVQRAQ----LNELLNELTKFIQK 475
           LI+AQTDFEL+S+PELCLLTYRY+P  VR+AL ++           +  LL++LT+ IQK
Sbjct: 434 LIEAQTDFELISEPELCLLTYRYVPAKVRLALAQAVAQHDKDKLDAIGSLLDDLTRAIQK 493

Query: 476 KQRETGKSFVSRTQLNPHQWDKLATIVFRVVLANPLTTKEILHNVLDEQREIAQQAPKLM 535
            QRE GKSFVSRT++ P ++      VFRVVLANPLTT+ IL  VL+EQR +A    +++
Sbjct: 494 TQREQGKSFVSRTRITPKRYGNDKRTVFRVVLANPLTTEAILAAVLEEQRALASGETEIL 553

Query: 536 RQIEHL 541
           + ++ L
Sbjct: 554 QALDAL 559