Pairwise Alignments

Query, 548 a.a., putative pyridoxal-dependent aspartate 1-decarboxylase from Vibrio cholerae E7946 ATCC 55056

Subject, 533 a.a., glutamate decarboxylase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  674 bits (1739), Expect = 0.0
 Identities = 334/517 (64%), Positives = 412/517 (79%), Gaps = 4/517 (0%)

Query: 16  LKIFTVPEGPDSTLTKIDEELSRNLNHFLRKHIVAEEKPLKEIEKDFSNAHIPEQPQFVS 75
           ++IFTVPE  DSTL+ I+++LS +L  FL   I A EKPL EIE DF    IP QP+FVS
Sbjct: 1   MRIFTVPEDADSTLSIIEQKLSEDLAGFLGDSIAALEKPLSEIETDFQTFEIPNQPRFVS 60

Query: 76  DHTQYLLDTLVSHSVHTASPSFIGHMTSALPYFLMPLSKIMIALNQNLVKIETSKAFTPL 135
           D+T  ++  LV+HSVHTA+PSFIGHMTSALPYF++PLSK+M+ LNQNLVKIETSKAFTPL
Sbjct: 61  DYTDEIMQNLVAHSVHTAAPSFIGHMTSALPYFVLPLSKMMVGLNQNLVKIETSKAFTPL 120

Query: 136 ERQVLGMIHRLIYGETDHFYQQWMHSAEHSLGAFCSGGTIANITALWVARNNALKAEGDF 195
           ERQVLGM+H LIY + D FY+ WMHSA HSLGAFCSGGT+ANITALW+ARN  LKA+GDF
Sbjct: 121 ERQVLGMMHHLIYAQHDDFYRNWMHSANHSLGAFCSGGTVANITALWIARNQLLKADGDF 180

Query: 196 PGVEKAGLFKAMRHYGHEGLAILVSERGHYSLKKAADVLGIGQEGLVAVKTDAHNRICPH 255
            GV + GL KA+RHY ++ LAILVSERGHYSL KA D+LGIG++ ++++ TDA N++   
Sbjct: 181 KGVTREGLIKALRHYDYDDLAILVSERGHYSLGKAVDLLGIGRDNIISIPTDADNKVDVT 240

Query: 256 DLEQKITELKANKIKVFAVVGVAGTTETGNIDPLRTIAQICQREQIHFHIDAAWGGATLM 315
            + +   EL   +IKV A+VGVAGTTETGNIDPL+ +A +      HFH+DAAWGGA+L+
Sbjct: 241 QMRKIAVELAHKRIKVMAIVGVAGTTETGNIDPLKQLAALASELNCHFHVDAAWGGASLL 300

Query: 316 SNRYRGLLDGVELADSVTIDAHKQLYIPMGAGMVLFKDPNAMRSIEHHAQYILRQGSKDL 375
           SN+YR LLDGVELADSVTIDAHKQ+Y+PMGAGMVLFK+P    +I HHA+YILR+GSKDL
Sbjct: 301 SNKYRHLLDGVELADSVTIDAHKQMYVPMGAGMVLFKNPEFAHAIAHHAEYILRRGSKDL 360

Query: 376 GSHTLEGSRSGMAMLVYASMHIISRPGYQLLIDQSIEKARYFADLIDAQTDFELVSQPEL 435
           GS TLEGSR GMAMLV+A + II R GY++LI+ S+EKARYFA+ IDA  DFELV+ PEL
Sbjct: 361 GSQTLEGSRPGMAMLVHACLQIIGRDGYEILINNSLEKARYFAEQIDAHPDFELVTAPEL 420

Query: 436 CLLTYRYLPEHV----RMALEKSQGVQRAQLNELLNELTKFIQKKQRETGKSFVSRTQLN 491
           CLLTYRY+P  V    ++A+E+    +  + NE L+ LT+FIQK QRE GKSFVSRT++ 
Sbjct: 421 CLLTYRYVPASVQAAMQVAIEQGDKAKLERFNEQLDGLTQFIQKHQREQGKSFVSRTRIQ 480

Query: 492 PHQWDKLATIVFRVVLANPLTTKEILHNVLDEQREIA 528
           P ++ +  T+VFRVVLANPLT+ EIL+ VL EQ EIA
Sbjct: 481 PARYFRQPTVVFRVVLANPLTSHEILNQVLIEQGEIA 517