Pairwise Alignments

Query, 284 a.a., transcriptional regulator HexR from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., Transcriptional regulator, RpiR family from Pseudomonas fluorescens FW300-N2E2

 Score =  125 bits (315), Expect = 8e-34
 Identities = 83/278 (29%), Positives = 145/278 (52%), Gaps = 3/278 (1%)

Query: 1   MNTLEKIQKNLENFSKSERKVAEVIMASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDT 60
           M+ L +I+   ++FS  E ++A +++     A  +S+  LA+ A+VS  T++RF R +  
Sbjct: 1   MDILYQIRSRQDSFSAGEGRIARLMLDDVGFAASASLDELAQRAEVSSATLSRFARTVGC 60

Query: 61  KGFPDFKLHLAQSLANGTPYVNRNVEEDDGPDAYTHKIFESTMACLDVAKNSLDPVQINR 120
           +   D +L LAQ+   G+ +++     +    A+  +I     A L    ++ +  + + 
Sbjct: 61  RDLRDLRLQLAQASGVGSRFLDPAGAPEQS--AFYGQIVGDIEATLRQHLSAFEESRFSD 118

Query: 121 AVDLLTQAKRISFFGLGASSAVA-RDAQNKFIRFNIPISCFEDIVMQRMSCINCTDNDVI 179
           AV ++ +A+ +  FGLG  SA+   + Q + +RF  PI+   D VM R++  + +   ++
Sbjct: 119 AVRMIGKARMVHAFGLGGWSALCGEELQVRLVRFGYPIAACRDPVMMRITATSLSAEHLV 178

Query: 180 VLISHTGRTKSQVEIANLARENGATVIAITAKDSPLDKASSLSICLDVPEDTDVYMPMAS 239
           +  S TG T   +    LAR  GA ++AIT  DSPL + + + + L   E + +Y P A+
Sbjct: 179 IACSLTGITPELLGAVELARSYGAPILAITRADSPLARLADVVLPLQGAETSFIYKPTAA 238

Query: 240 RVVQMTVIDVLATGFTLRRGSGFRENLKRVKEVLKDSR 277
           R   +  IDVLAT   L      +E L+RVK  L D R
Sbjct: 239 RYGMLLAIDVLATELALAHPEDNQERLRRVKLALDDYR 276