Pairwise Alignments

Query, 284 a.a., transcriptional regulator HexR from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., putative HTH-type transcriptional regulator from Phaeobacter inhibens DSM 17395

 Score = 57.0 bits (136), Expect = 5e-13
 Identities = 66/282 (23%), Positives = 123/282 (43%), Gaps = 16/282 (5%)

Query: 5   EKIQKNLENFSKSERKVAEVIMASPQTAIHSSIATLAKMADVSEPTVNRFCRRLDTKGFP 64
           E I++   + +++ERK A  ++A+   A  +SI  +A  ADVS PTV R  ++L  KG+P
Sbjct: 10  ELIREQYASLTQAERKFANALLANYPAAGLASITIVAANADVSTPTVARMVQKLGFKGYP 69

Query: 65  DFKLHLAQSL-ANGT-PYVNRNVEEDDGPDAY-THKIFESTMACLDVAKNSLDPVQINRA 121
            F   L + L A G+ P   R     + PD +  ++  ++    L    +++D  Q + A
Sbjct: 70  QFHQALLKELEAKGSGPTQRRANWASEAPDGHLLNRFAQAVTDNLSQTFSNVDSEQFDAA 129

Query: 122 VDLLTQAK-RISFFGLGASSAVARDAQNKF--IRFNIPISCFEDIVMQRMSCINCTDNDV 178
           V  L   + R+   G   + A+A  A   F  IR  +               ++  + D 
Sbjct: 130 VRQLADTEGRLYVVGGRITRALADYAFTHFQAIRQRVTHMTSSSATWPHY-VLDMVEGDT 188

Query: 179 IVLISHTGRTKSQVEIANLARENGATVIAITAK-DSPLDK--ASSLSICLDVPEDTDVYM 235
           +++        +   +A LA E G  VI IT +  SP+    A + +  +++P   D   
Sbjct: 189 LLMFDVRRYETNLQRLAELASERGVQVILITDQWSSPIGSVAAQTFNCWVEIPSAWD--- 245

Query: 236 PMASRVVQMTVIDVLATGFTLRRGSGFRENLKRVKEVLKDSR 277
              S +  M +++ + +     R    R   +++  +   +R
Sbjct: 246 ---SNISTMMLLEAMISAAQEERWDETRARYEKLDTIFDTTR 284