Pairwise Alignments

Query, 558 a.a., transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 549 a.a., transporter from Azospirillum brasilense Sp245

 Score =  145 bits (365), Expect = 5e-39
 Identities = 139/565 (24%), Positives = 253/565 (44%), Gaps = 46/565 (8%)

Query: 14  ILLIFVVLAIGLSFGKIRFGSFQLGNSIGVLITSLIMGHL----GFSFTPEALTI----G 65
           + ++ +  A+GL+ G IR     LG   GVL   + +GH     G +   E +      G
Sbjct: 8   VFMLGITSALGLALGHIRLRGVGLGIG-GVLFAGIAVGHFAKQAGVTLNAEMMEFIRDFG 66

Query: 66  FMLFIYCVGIEAGPNFFGIFFRDGKHYLILSLVVLITATWIAYFGGYYLNLDYGLAAGMM 125
            +LF+Y +GI+ GP FF    + G     L+L+++ ++  +      +  +  G   G+ 
Sbjct: 67  LILFVYTIGIQVGPGFFAALKKSGLALNGLALLMVGSSILLTAILVLFDLVPLGSGLGVF 126

Query: 126 AGALTSTPVLVGAQDALNSGLAAVPRHMDLSLILDNVSVGYAMA-YLIGLISMIMFAKLL 184
           AG +T+ P L  +Q  L   + A    M L  +   V+  + +A  L+ + ++ +  ++ 
Sbjct: 127 AGGVTNAPALAASQQVLKE-VGADAAVMALPGLAFAVTYPFGIAGNLLAMAAVRIVFRID 185

Query: 185 PKLQKQNLSDSAQQIAQERGLGSQR-KVYLPIIRAYRVGPELINWIDGRNLRELGIYRQT 243
           P  Q++  +  A + A+   L +    V  P +R  R+G             +L +    
Sbjct: 186 P--QEEARAFEAARRAEVAALDTMDIAVTNPALRGVRLG-------------DLTLLPSL 230

Query: 244 GCYIERIRRHGILAHPDGDAILQEGDEIALVGFPDSHARLDPSFRNGKEVFDRNLLDLRI 303
           G    R+ R G L  P  D  L+EGD + +VG         P     + +  R   D+R+
Sbjct: 231 GVCASRLLRGGQLRVPGEDTRLEEGDVLHVVG-------PRPKLEQVRLLMGREA-DVRL 282

Query: 304 SE-------EEIVVKSDSIAGKRLSDLNLS-EYGCFLNRVVRAQIEMPMDLDIVLAKGDV 355
           +        E IVV ++ + GK ++ LNL       ++RV RA +E+  +  + L  GD+
Sbjct: 283 TTKGSDLRWERIVVTANPVLGKSIAALNLKGACDVVVSRVNRAGVELVPNAALKLQFGDI 342

Query: 356 LQVSGEKSKVKGLADKIGFISVHSQMADLLAFCSFFILGILFGLVTMTFGQVS--FSLGN 413
           L V G+   +K     IG      Q  +++       LG L G + +    +     LG 
Sbjct: 343 LTVIGKPDDLKAAGCIIGNSERRLQTVEMIPVFVGITLGALLGAIPLFLPGMPAPLRLGM 402

Query: 414 AVGLLLSGITLGFLRANHPTFGYVPQGALNMVKDLGLAIFMVGIGLNAGSKMFQHL-SEV 472
           A G L+  I L  +    P   ++P  A   ++++G+ +F+  +G+ +G +  + + S  
Sbjct: 403 AGGPLIVAIVLARIGHIGPLVWFMPPAANLALREIGIVLFLAVLGIASGDRFVETMASGA 462

Query: 473 GVQVIGLAFLVSVVPVVFAYLVGAYILKMNRALLFGAIIGARTCAPAMDVVNEYAKSTIP 532
           G+  +    LV++VP++   L+   ++K+N   + G + GA+T  P +   N    S  P
Sbjct: 463 GLPWMAWGVLVTLVPLLLTGLLARGVMKLNFLSICGVLAGAQTNPPGLAYANAVVASEAP 522

Query: 533 ALGYAGTYAIANILMTLTGTIFILL 557
           AL YA  Y +A  L  L   + +L+
Sbjct: 523 ALAYATVYPLAMCLRILAPQLLVLM 547