Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 756 a.a., ATP-dependent Clp protease ATP-binding subunit clpA from Pseudomonas stutzeri RCH2

 Score =  987 bits (2552), Expect = 0.0
 Identities = 493/749 (65%), Positives = 611/749 (81%), Gaps = 2/749 (0%)

Query: 1   MLNKELESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDT 60
           MLN+ELE +LN AF  AR KRHEFMTVEHLLLALL+N+AA   L AC A +D LR +L  
Sbjct: 1   MLNRELEVTLNLAFKEARTKRHEFMTVEHLLLALLDNEAAATVLRACGASLDKLRHDLQE 60

Query: 61  FIDQTTPLIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHA 120
           FID TTPLIP++DE RETQPTL FQRVLQRAVFHVQSSG+ EVTGANVLVAIFSEQES A
Sbjct: 61  FIDSTTPLIPQHDEERETQPTLGFQRVLQRAVFHVQSSGKREVTGANVLVAIFSEQESQA 120

Query: 121 AYLLKKNDISRLDIVNFISHGITKASNHSEDSSSDS-FGSSDTSEEVSADERLESFATNL 179
            +LLK+ +++R+D+VN+I+HGI+K   ++    SD+     D  E  ++   L+++A+NL
Sbjct: 121 VFLLKQQNVARIDVVNYIAHGISKVPGNAGSPESDAEMQDEDGGESGASSNPLDAYASNL 180

Query: 180 NQLAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNV 239
           N+LA+QG+IDPL+GR+ E+ER  Q+L RRRKNNPLLVGEAGVGKTAIAEGLA RIV+  V
Sbjct: 181 NELARQGRIDPLVGRENEVERVAQILARRRKNNPLLVGEAGVGKTAIAEGLAKRIVDNQV 240

Query: 240 PEVIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIGAGAA 299
           P+++  SV+YSLD+G+LLAGTKYRGDFEKRFK++L +L K   AILFIDEIHTIIGAGAA
Sbjct: 241 PDLLADSVVYSLDLGALLAGTKYRGDFEKRFKALLGELRKRPHAILFIDEIHTIIGAGAA 300

Query: 300 SGGQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTK 359
           SGG +DA+NL+KPLLSSG++RCIGSTT+QE+  IFEK+RAL+RRFQK+D+ EPS++DT  
Sbjct: 301 SGGVMDASNLLKPLLSSGEIRCIGSTTFQEFRGIFEKDRALARRFQKVDVSEPSVEDTIG 360

Query: 360 ILMGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLMPASR 419
           IL GLK ++E HH + Y+++ALRAA EL+++YIN+RH+PDKAIDVIDEAGA  RL P  +
Sbjct: 361 ILRGLKGRFEQHHHIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPEDQ 420

Query: 420 RKKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIKL 479
           R K + V ++E +VAK+ARIP K VSSSDK++L+NL++ +K+ VFGQD AID L  AIKL
Sbjct: 421 RVKCIDVEQVEDIVAKIARIPPKHVSSSDKELLRNLERDLKLTVFGQDDAIDSLATAIKL 480

Query: 480 TRAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERHSVSRLIGA 539
           +RAGL A  KPVGSFLFAGPTGVGKTE   QL++ LG+EL+RFDMSEY ERH+VSRLIGA
Sbjct: 481 SRAGLKAPDKPVGSFLFAGPTGVGKTEAARQLARALGVELIRFDMSEYMERHTVSRLIGA 540

Query: 540 PPGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADF 599
           PPGYVG+DQGGLLT+A+ K PH V+LLDEIEKAHP++FNLLLQVMD+GTLTDNNGRKADF
Sbjct: 541 PPGYVGFDQGGLLTEAITKQPHCVLLLDEIEKAHPEVFNLLLQVMDHGTLTDNNGRKADF 600

Query: 600 RNVILVMTTNAGVAETVKKSIGLIQQDNSHDAMSEIKKVFTPEFRNRLDHIIWFNSLDER 659
           RNVI++MTTNAG     + SIG   QD++ DAM  IKK FTPEFRNRLD II F  L   
Sbjct: 601 RNVIIIMTTNAGAETAARASIGFTLQDHASDAMEVIKKSFTPEFRNRLDTIIQFGRLSHE 660

Query: 660 VIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKKPL 719
           VI  +VDKF++ELQAQL+ + V+LEVS+ AR WLA  GYD +MGARPM R+IQ+++K+PL
Sbjct: 661 VIKSIVDKFLIELQAQLEDKHVTLEVSDAARGWLAEHGYDAQMGARPMARLIQDKIKRPL 720

Query: 720 ANELLFGSLVD-GGTVKVTLSDDRLAFEY 747
           A E+LFG L + GG V + + D    FE+
Sbjct: 721 AEEILFGELAEHGGVVHIDIRDGEPFFEF 749