Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 757 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Pseudomonas syringae pv. syringae B728a

 Score =  997 bits (2578), Expect = 0.0
 Identities = 499/755 (66%), Positives = 612/755 (81%), Gaps = 3/755 (0%)

Query: 1   MLNKELESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDT 60
           MLN+ELE +LN AF  AR KRHEFMTVEHLLLALL+N+AA   L AC A++D L+ +L  
Sbjct: 1   MLNRELEVTLNLAFKEARSKRHEFMTVEHLLLALLDNEAAATVLRACGANLDKLKHDLQE 60

Query: 61  FIDQTTPLIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHA 120
           FID TTPLIP +DE RETQPTL FQRVLQRAVFHVQSSG+ EVTGANVLVAIFSEQES A
Sbjct: 61  FIDSTTPLIPVHDEDRETQPTLGFQRVLQRAVFHVQSSGKREVTGANVLVAIFSEQESQA 120

Query: 121 AYLLKKNDISRLDIVNFISHGITKASNHSEDSSSDSFGSSDTS--EEVSADERLESFATN 178
            +LLK+  ++R+D+VN+I+HGI+K   H E SS       D    E  S+   L+++A+N
Sbjct: 121 VFLLKQQSVARIDVVNYIAHGISKVPGHGEHSSEGEQDMQDDEGGEASSSGNPLDAYASN 180

Query: 179 LNQLAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGN 238
           LN+LA+QG+IDPL+GR+ E+ER  Q+L RRRKNNPLLVGEAGVGKTAIAEGLA RIV+  
Sbjct: 181 LNELARQGRIDPLVGRESEVERVAQILARRRKNNPLLVGEAGVGKTAIAEGLAKRIVDNQ 240

Query: 239 VPEVIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIGAGA 298
           VP+++  SV+YSLD+G+LLAGTKYRGDFEKRFK++L +L K   AILFIDEIHTIIGAGA
Sbjct: 241 VPDLLANSVVYSLDLGALLAGTKYRGDFEKRFKALLNELRKRPQAILFIDEIHTIIGAGA 300

Query: 299 ASGGQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTT 358
           ASGG +DA+NL+KPLLSSG++RCIGSTT+QE+  IFEK+RAL+RRFQK+D+ EPS++DT 
Sbjct: 301 ASGGVMDASNLLKPLLSSGEIRCIGSTTFQEFRGIFEKDRALARRFQKVDVSEPSVEDTI 360

Query: 359 KILMGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLMPAS 418
            IL GLK+++E HH + Y+++ALRAA EL+++YIN+RH+PDKAIDVIDEAGA  RL P  
Sbjct: 361 GILRGLKSRFEQHHSIEYSDEALRAAAELASRYINDRHMPDKAIDVIDEAGAYQRLQPVE 420

Query: 419 RRKKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIK 478
           +R K + V E+E +VAK+ARIP K V+SSDK++L+NL++ +K+ VFGQDAAID L+ AIK
Sbjct: 421 KRAKRIDVPEVEDIVAKIARIPPKHVNSSDKELLRNLERDLKLTVFGQDAAIDSLSTAIK 480

Query: 479 LTRAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERHSVSRLIG 538
           L+RAGL +  KPVGSFLFAGPTGVGKTE   QL+K LG+EL+RFDMSEY ERH+VSRLIG
Sbjct: 481 LSRAGLKSPDKPVGSFLFAGPTGVGKTEAARQLAKALGVELIRFDMSEYMERHTVSRLIG 540

Query: 539 APPGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKAD 598
           APPGYVG+DQGGLLT+A+ + PH V+LLDEIEKAHP++FNLLLQVMD+GTLTDNNGRKAD
Sbjct: 541 APPGYVGFDQGGLLTEAITRQPHCVLLLDEIEKAHPEVFNLLLQVMDHGTLTDNNGRKAD 600

Query: 599 FRNVILVMTTNAGVAETVKKSIGLIQQDNSHDAMSEIKKVFTPEFRNRLDHIIWFNSLDE 658
           FRNVI++MTTNAG     + SIG   QD+S DAM  IKK FTPEFRNRLD II F  L  
Sbjct: 601 FRNVIVIMTTNAGAESAARASIGFTHQDHSSDAMEVIKKSFTPEFRNRLDTIIQFGRLSH 660

Query: 659 RVIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKKP 718
            VI  VVDKF+ ELQAQL+ + V LEVSE AR WLA  GYD  MGARPM R+IQ+++K+P
Sbjct: 661 EVIKSVVDKFLTELQAQLEDKRVLLEVSEAARSWLAQGGYDAAMGARPMARLIQDKIKRP 720

Query: 719 LANELLFGSLVD-GGTVKVTLSDDRLAFEYFGTRE 752
           LA E+LFG L + GG V + + D  + F++  T E
Sbjct: 721 LAEEILFGELSEHGGVVHIDIKDGEITFDFETTAE 755