Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 824 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  523 bits (1347), Expect = e-152
 Identities = 305/803 (37%), Positives = 469/803 (58%), Gaps = 95/803 (11%)

Query: 17  ARDKRHEFMTVEHLLLALLENDA--AREALLACQADIDVLRRELDTFIDQTTPLIPKNDE 74
           AR   H F+  E +LL L+      A + L +   ++   R E++  I + +  +     
Sbjct: 20  ARRLGHNFVGTEQILLGLIGEGTGVAAKVLKSMGVNLKDARIEVEKIIGRGSGFVAV--- 76

Query: 75  TRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHAAYLLKKNDISRLDI 134
             E   T   +RVL+ ++   +  G + +   ++L+ +  E E  AA +L+   +   D+
Sbjct: 77  --EIPFTPRAKRVLELSLEEARQLGHNYIGTEHLLLGLIREGEGVAARVLENLGV---DL 131

Query: 135 VNFISHGITKASNHSEDSSSDSFGSSDTSEEVSADERLESFATNLNQLAKQGQIDPLIGR 194
               +  I      +E S+    G + T         L+ F +NL Q A  G++DP++GR
Sbjct: 132 SKVRTQVIRMLGETAEVSTGGGQGRTKTPT-------LDEFGSNLTQQAADGKLDPVVGR 184

Query: 195 DKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNVPEVIQRSVIYSLDIG 254
            KE+ER IQ+L RR KNNP+L+GE GVGKTAIAEGLA RI  G++P++++   + +LDIG
Sbjct: 185 QKEIERVIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIATGDIPDILEDKRVVTLDIG 244

Query: 255 SLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIGAGAASGGQVDAANLIKPLL 314
            L+AGTKYRG+FE+R K I+ ++    + IL IDE+HT+IGAGAA G  +DAAN++KP L
Sbjct: 245 LLVAGTKYRGEFEERLKKIMDEIRSAGNVILVIDEVHTLIGAGAAEGA-IDAANILKPAL 303

Query: 315 SSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTKILMGLKTKYEAHHDV 374
           + G+L+CIG+TT  EY    E++ AL RRFQ + + EPS+DDT +IL GL+ +YE HH +
Sbjct: 304 ARGELQCIGATTLDEYRKHIERDAALERRFQPVMVGEPSVDDTIEILRGLRERYEQHHKL 363

Query: 375 RYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLM-----PASRR--------- 420
           +  ++AL AA +L+ +YI++R LPDKAID+IDEAG+R RLM     PA++          
Sbjct: 364 KIADEALEAAAKLADRYISDRFLPDKAIDLIDEAGSRVRLMNSQLPPAAKELDKELRQVL 423

Query: 421 -----------------------------------KKTVGVAEIES-----------MVA 434
                                              KK  G +  +            +VA
Sbjct: 424 KDKDDAVRSQDFDKAGELRDREMEIKTQIRSIAQSKKADGTSSTDDSPIVTEEDIAHIVA 483

Query: 435 KMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIKLTRAGLGAEHKPVGSF 494
               +P   ++ S+   L N+++ +   + GQD A+  ++ AI+  R GL   ++P+ SF
Sbjct: 484 SWTGVPVNKLTESESTKLLNMEETLHSRLIGQDEAVKAVSRAIRRARVGLKNPNRPIASF 543

Query: 495 LFAGPTGVGKTEVTLQLSK-LLGIE--LLRFDMSEYGERHSVSRLIGAPPGYVGYDQGGL 551
           +F+GPTGVGKTE+T  L+    G E  ++R DMSEY ERH+VS+LIG+PPGYVGY++GG 
Sbjct: 544 IFSGPTGVGKTELTKALAAYFFGSEEAMIRLDMSEYMERHTVSKLIGSPPGYVGYNEGGQ 603

Query: 552 LTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADFRNVILVMTTNAG 611
           LT+AV + P++VVLLDEIEKAHPD+FNLLLQ++++G LTD  GR  DF+N ++++T+N G
Sbjct: 604 LTEAVRRRPYTVVLLDEIEKAHPDVFNLLLQLLEDGRLTDAKGRTVDFKNTLIILTSNIG 663

Query: 612 VAETVKKS--------IGLIQQDNSHDAM-----SEIKKVFTPEFRNRLDHIIWFNSLDE 658
            ++ ++K          G+ + +N ++ +      E+K+ F PEF NRLD II F  L++
Sbjct: 664 -SKVIEKGGGGLGFEFSGVDEAENQYNRIRSLVNEELKQYFRPEFLNRLDEIIVFRQLNK 722

Query: 659 RVIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKKP 718
             + ++ D  + E+  ++  +G+SL V+E  +  L  +GY+   GARP+ R I   L+  
Sbjct: 723 EEVKEIADIMLREVFGRMLEKGISLSVTEKFKDRLVEEGYNPSYGARPLRRAIMRLLEDS 782

Query: 719 LANELLFGSLVDGGTVKVTLSDD 741
           LA E L G L +G T  V + ++
Sbjct: 783 LAEEFLSGKLREGDTAVVDIGEE 805