Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 753 a.a., ATP-dependent Clp protease, ATP-binding subunit ClpA (RefSeq) from Shewanella amazonensis SB2B

 Score = 1052 bits (2721), Expect = 0.0
 Identities = 533/744 (71%), Positives = 639/744 (85%), Gaps = 3/744 (0%)

Query: 1   MLNKELESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDT 60
           MLNK+LE +LN AF +ARD RHE+MTVEHLLLAL++N +A++AL+AC A+ID LR E+ T
Sbjct: 1   MLNKDLEVTLNLAFQQARDARHEYMTVEHLLLALIDNPSAQDALVACGANIDKLREEVAT 60

Query: 61  FIDQTTPLIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHA 120
           FI QTTP+I   D+ RETQPTL FQRVLQRAVFHVQSSGR+EVTGANVLVAIFSEQES A
Sbjct: 61  FISQTTPVITDPDDDRETQPTLGFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120

Query: 121 AYLLKKNDISRLDIVNFISHGITKASNHSEDSSSDSFGS-SDTSEEVSADERLESFATNL 179
            YLL+++DI+RLD+VN+ISHG +K+ +  ++S  +     S+  EE  +   L  FA NL
Sbjct: 121 VYLLRRSDITRLDVVNYISHGFSKSEDAPQESEQERIEDHSEQGEEQRS--MLSQFAANL 178

Query: 180 NQLAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNV 239
           N LA QG IDPLIGRD E+ER+IQ+LCRRRKNNPLLVGEAGVGKTAIAEGLA+RIV  +V
Sbjct: 179 NLLAAQGVIDPLIGRDNEIERSIQILCRRRKNNPLLVGEAGVGKTAIAEGLAYRIVNDDV 238

Query: 240 PEVIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIGAGAA 299
           PEV++ + +YSLD+G+LLAGTKYRGDFEKRFKS+LK+L  +K AILFIDEIHTIIGAGAA
Sbjct: 239 PEVMRDATVYSLDLGALLAGTKYRGDFEKRFKSLLKELTADKHAILFIDEIHTIIGAGAA 298

Query: 300 SGGQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTK 359
           SGG +DA+NL+KPLLSSG LRC+GSTT+QEY +IFEK+RAL+RRFQKIDI EPS+ +TTK
Sbjct: 299 SGGVMDASNLLKPLLSSGTLRCMGSTTFQEYQSIFEKDRALARRFQKIDINEPSVAETTK 358

Query: 360 ILMGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLMPASR 419
           ILMGLK+KYE HH VRYT  AL  A ELSAK+IN+RHLPDKAIDVIDEAGAR  + PAS+
Sbjct: 359 ILMGLKSKYEEHHGVRYTQAALACAAELSAKHINDRHLPDKAIDVIDEAGARMAMQPASK 418

Query: 420 RKKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIKL 479
           R+KT+G AEIE+++AK+ARIPEKSVS+SDKD+LKNL++ +KM+VFGQD AI+ L+ AI+L
Sbjct: 419 RRKTIGQAEIEAIIAKIARIPEKSVSTSDKDMLKNLERNLKMVVFGQDKAIESLSAAIRL 478

Query: 480 TRAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERHSVSRLIGA 539
           +R+GLGA++KPVGSFLFAGPTGVGKTEVT QL+K LG++L+RFDMSEY E H+VSRLIGA
Sbjct: 479 SRSGLGADNKPVGSFLFAGPTGVGKTEVTNQLAKCLGLKLVRFDMSEYMEAHTVSRLIGA 538

Query: 540 PPGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADF 599
           PPGYVGYDQGGLLTDAVIK PH VVLLDEIEKAHPD++NLLLQVMD+GTLTDNNGRKADF
Sbjct: 539 PPGYVGYDQGGLLTDAVIKQPHCVVLLDEIEKAHPDVYNLLLQVMDHGTLTDNNGRKADF 598

Query: 600 RNVILVMTTNAGVAETVKKSIGLIQQDNSHDAMSEIKKVFTPEFRNRLDHIIWFNSLDER 659
           R+V LVMTTNAGV ETV+KSIG  QQD+SHDAMSEI +VF+PEFRNRLD IIWFN LD  
Sbjct: 599 RHVTLVMTTNAGVQETVRKSIGFKQQDHSHDAMSEINRVFSPEFRNRLDSIIWFNHLDLT 658

Query: 660 VIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKKPL 719
           +I +VVDKF+ ELQAQLDA+ V+L VS++AR  LA KGYD+ MGARPM RV+++ +K+PL
Sbjct: 659 IIAKVVDKFLTELQAQLDAKRVTLMVSDEARTLLAEKGYDKAMGARPMARVVKDLIKRPL 718

Query: 720 ANELLFGSLVDGGTVKVTLSDDRL 743
           A+E+LFG L  GG   V   D  +
Sbjct: 719 ADEILFGELEHGGMAHVDAKDGEI 742