Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 779 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA (NCBI) from Rhodospirillum rubrum S1H

 Score =  899 bits (2322), Expect = 0.0
 Identities = 455/753 (60%), Positives = 579/753 (76%), Gaps = 6/753 (0%)

Query: 1   MLNKELESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDT 60
           ML++ LE +L+ A A A  +RHE+ T+EHLLLAL+++  A   L AC  D++ LR++L  
Sbjct: 1   MLSRNLEQTLHRALALASQRRHEYATLEHLLLALVDDQDAVSVLKACSVDVEKLRKQLAE 60

Query: 61  FID-QTTPLIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESH 119
           F++ + T L+    E  + +PT  FQRV+QRA  HVQSSGR +VTGAN+LVA+FSE+ESH
Sbjct: 61  FVEHELTGLVVAAPEG-DPKPTAGFQRVVQRAAIHVQSSGREQVTGANILVALFSERESH 119

Query: 120 AAYLLKKNDISRLDIVNFISHGITKASNHSEDSSSDSFGSSDTSEEVSA----DERLESF 175
           A Y L+  D++RLD VN+ISHGI KA  H +  +         SEE +      E L+++
Sbjct: 120 AVYFLQMQDMTRLDAVNYISHGIAKAPGHGQARAPRGADEETKSEETATVKKGREALDAY 179

Query: 176 ATNLNQLAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIV 235
             NLN+ A +G+IDPLIGRD+E+ERTIQ+LCRR KNNPLLVG+ GVGKTAI EGLA RIV
Sbjct: 180 CVNLNEKAAEGKIDPLIGRDQEVERTIQILCRRNKNNPLLVGDPGVGKTAIVEGLARRIV 239

Query: 236 EGNVPEVIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIG 295
              VPEV+  + I+SLD+G+LLAGT+YRGDFE+R K+++ +LE  + A+LFIDEIHT+IG
Sbjct: 240 HKEVPEVLHNATIFSLDMGALLAGTRYRGDFEERLKAVVGELEAYEGAVLFIDEIHTVIG 299

Query: 296 AGAASGGQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLD 355
           AGA SGG +DA+NL+KP L+ G LRC+GSTTY+E+ N FEK+RAL RRFQKID+ EPS++
Sbjct: 300 AGATSGGSMDASNLLKPALAQGLLRCVGSTTYKEFRNHFEKDRALVRRFQKIDVNEPSVE 359

Query: 356 DTTKILMGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLM 415
           DT KIL G+K+ YE HH VRYTN A+RAAVELS KYIN+R LPDKAIDVIDE GA   L+
Sbjct: 360 DTVKILRGIKSYYEDHHKVRYTNDAVRAAVELSNKYINDRKLPDKAIDVIDEVGAARMLL 419

Query: 416 PASRRKKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTE 475
           P SRR+KTV V +IE +VAK+ARIP KSVS  D+ +LK+L++ +K +VFGQD AI+ L  
Sbjct: 420 PESRRRKTVTVRDIEEIVAKIARIPPKSVSRDDQAVLKSLERDLKTMVFGQDQAIEALAS 479

Query: 476 AIKLTRAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERHSVSR 535
           AIKL RAGL    KP+G++LF+GPTGVGKTEV  QL+++LGIEL+RFDMSEY ERHSVSR
Sbjct: 480 AIKLARAGLREPTKPIGNYLFSGPTGVGKTEVARQLARILGIELVRFDMSEYMERHSVSR 539

Query: 536 LIGAPPGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGR 595
           LIGAPPGYVG+DQGGLLTDAV + PH V+LLDEIEKAHPD+FN+LLQVMD+G LTD+NG+
Sbjct: 540 LIGAPPGYVGFDQGGLLTDAVDQQPHCVLLLDEIEKAHPDLFNILLQVMDHGKLTDHNGK 599

Query: 596 KADFRNVILVMTTNAGVAETVKKSIGLIQQDNSHDAMSEIKKVFTPEFRNRLDHIIWFNS 655
             DFRNVIL+MTTNAG     K ++G  ++  S D   EI++ F+PEFRNRLD II F +
Sbjct: 600 HVDFRNVILIMTTNAGAQMLAKNAMGFGRETRSGDDTEEIERSFSPEFRNRLDAIIPFAN 659

Query: 656 LDERVIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQL 715
           L    +  VVDKF++EL+AQL  R V++E+++ AR WLA KGYDR MGARP+ R+IQE +
Sbjct: 660 LAAETVGMVVDKFVMELEAQLADRNVTIELTDKARSWLAEKGYDRRMGARPLARIIQETI 719

Query: 716 KKPLANELLFGSLVDGGTVKVTLSDDRLAFEYF 748
           KKPLA ELLFG L  GG VKV + D +  F +F
Sbjct: 720 KKPLAEELLFGKLTKGGRVKVGVKDGKPDFAFF 752