Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 862 a.a., ATP-dependent Clp protease ATP-binding subunit from Parabacteroides merdae CL09T00C40

 Score =  518 bits (1335), Expect = e-151
 Identities = 307/845 (36%), Positives = 483/845 (57%), Gaps = 109/845 (12%)

Query: 3   NKELESSLNGAFARARDKRHEFMTVEHLLLALLENDAAR--EALLACQADIDVLRRELDT 60
           +K L   +  +   A   ++ ++  EHL+L ++ +   +  +AL     D   ++R+++ 
Sbjct: 6   SKRLMDVIEYSREEAARLQNSYIGPEHLMLGIIRDGEGKAVQALRELNVDEWDIKRKIEQ 65

Query: 61  FIDQTTPLIPKNDETR-ETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESH 119
            I  T   I   D  + +   + + +RVL+ ++   +   + E    ++L+AI  E+ + 
Sbjct: 66  EIKNT---IDAEDAVQHDIAISKTTERVLRMSMLESRLFKKKETGTEHLLLAILKEEFNV 122

Query: 120 AAYLLKKNDISRLDIVNFIS--------------------HGITKASNHSEDSSSDSFGS 159
           AA +L +  I+   I N++                      GI+      ++   D + S
Sbjct: 123 AAKVLNEVGITYRSIYNYLISGTGLKHMDDFIGEEDAEHFEGISDGYTDDDEDDDDDYSS 182

Query: 160 SDTSEEVSADER------------LESFATNLNQLAKQGQIDPLIGRDKELERTIQVLCR 207
              S   S+               L++F T++ + A + ++DP++GR+KE+ER  Q+L R
Sbjct: 183 RRESPRSSSGAGSAQPKSPNDTPVLDNFGTDMTRAAAENRLDPIVGREKEIERLAQILSR 242

Query: 208 RRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNVPEVIQRSVIYSLDIGSLLAGTKYRGDFE 267
           R+KNNP+L+GE GVGK+AI EGLA RI++  V  V+    + SLD+ S++AGTKYRG FE
Sbjct: 243 RKKNNPVLIGEPGVGKSAIVEGLALRIIQRKVSRVLFDKRVISLDMASIVAGTKYRGQFE 302

Query: 268 KRFKSILKQLEKEKDAILFIDEIHTIIGAGAASGGQVDAANLIKPLLSSGKLRCIGSTTY 327
           +R K+IL +L K  + ILFIDEIHTI+GAG+AS G +DAAN++KP L+ G+++CIG+TT 
Sbjct: 303 ERIKAILNELSKNPNIILFIDEIHTIVGAGSAS-GSMDAANMLKPALARGEIQCIGATTL 361

Query: 328 QEYSNIFEKERALSRRFQKIDIVEPSLDDTTKILMGLKTKYEAHHDVRYTNKALRAAVEL 387
            EY    EK+ AL RRFQK+ +   + ++T +IL  +K +YE HH+V YT +AL+A V+L
Sbjct: 362 DEYRKNIEKDGALERRFQKVIVDPTTAEETLQILQNIKARYEEHHNVIYTPEALQACVKL 421

Query: 388 SAKYINERHLPDKAIDVIDEAGARARL--------------------------------- 414
           + +YI++R+ PDKAID +DEAG+R  +                                 
Sbjct: 422 TERYISDRNFPDKAIDALDEAGSRVHISNITVPKSIEELEAKIEATKTEKLAAVKSQNFE 481

Query: 415 MPASRRKK------------------------TVGVAEIESMVAKMARIPEKSVSSSDKD 450
           + AS R K                        TV   ++  +VA M+ +P + ++ ++  
Sbjct: 482 LAASFRDKERQYLLQLEAAKAKWEQELQEHRETVDEDKVAEVVAMMSGVPVQRIAKAENL 541

Query: 451 ILKNLDQKMKMLVFGQDAAIDVLTEAIKLTRAGLGAEHKPVGSFLFAGPTGVGKTEVTLQ 510
            L  + + +K  V GQD A+  + +AI+  R GL   +KP+G+F+F GPTGVGKT +  +
Sbjct: 542 KLLEMAENLKKKVVGQDDAVQKIVKAIQRNRVGLKDPNKPIGTFMFLGPTGVGKTHLAKK 601

Query: 511 LSKLL---GIELLRFDMSEYGERHSVSRLIGAPPGYVGYDQGGLLTDAVIKHPHSVVLLD 567
           L++ L      L+R DMSEY E+ +VSRLIGAPPGYVGY++GG LT+ V + P+SVVLLD
Sbjct: 602 LAEYLFDSADALVRIDMSEYLEKFAVSRLIGAPPGYVGYEEGGQLTEKVRRKPYSVVLLD 661

Query: 568 EIEKAHPDIFNLLLQVMDNGTLTDNNGRKADFRNVILVMTTNAGVAET---------VKK 618
           EIEKAHPD+FNLLLQV+D G LTD+ GR+ DF+N IL+MT+N G  +            +
Sbjct: 662 EIEKAHPDVFNLLLQVLDEGRLTDSLGRRIDFKNTILIMTSNIGTRQLKDFGRGVGFSSQ 721

Query: 619 SIGLIQQDNSHDAMSE-IKKVFTPEFRNRLDHIIWFNSLDERVIHQVVDKFIVELQAQLD 677
           + G   +D S   + + + K F PEF NR+D II F+ LD+  IH+++D  +  L  ++ 
Sbjct: 722 AAGEPDKDFSRSVIQKALNKAFAPEFLNRVDDIIMFDQLDKEAIHKIIDIELQGLYKRVA 781

Query: 678 ARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKKPLANELLFGSLVDGGTVKVT 737
             G SLE+++ A+ ++A KGYD + GARP+ R IQ+ L+  +A  ++  S+ +G T+ V 
Sbjct: 782 GLGYSLELTDAAKDFVATKGYDIQFGARPLKRAIQKYLEDEMAEMIIRASVGEGDTIVVD 841

Query: 738 LSDDR 742
              D+
Sbjct: 842 FDKDK 846