Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 773 a.a., ATP-dependent Clp protease ATP-binding subunit from Phaeobacter inhibens DSM 17395

 Score =  876 bits (2263), Expect = 0.0
 Identities = 444/745 (59%), Positives = 567/745 (76%), Gaps = 9/745 (1%)

Query: 6   LESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDTFIDQT 65
           LE +++ A A A ++RHEF T+EHLLLALL+   A   + AC  D+  LR  L  F+D+ 
Sbjct: 8   LEQAIHAALALANERRHEFATLEHLLLALLDEPEAARVMRACSVDLTELRATLVEFVDED 67

Query: 66  TPLIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHAAYLLK 125
              +  + +  E  PT +FQRV+QRA  HVQSSGR+EVTGANVLVAIF+E+ES AAY L+
Sbjct: 68  LANLVTDIDGSEAVPTAAFQRVIQRAAIHVQSSGRTEVTGANVLVAIFAERESDAAYFLQ 127

Query: 126 KNDISRLDIVNFISHGITKASNHSEDSSSDSFGSSD-------TSEEVSADERLESFATN 178
             D++R D VNFI+HG+ K     E  S    GS +       T+E    +  L  +  +
Sbjct: 128 DQDMTRYDAVNFIAHGVAKDPAFGE--SRPVSGSPEVEDEPQPTTEGDKKESALAKYCVD 185

Query: 179 LNQLAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGN 238
           LN+ +++G IDPLIGR  E+ER IQVLCRRRKNNPLLVG+ GVGKTAIAEGLA +IV G 
Sbjct: 186 LNEKSREGDIDPLIGRSHEVERCIQVLCRRRKNNPLLVGDPGVGKTAIAEGLARKIVAGE 245

Query: 239 VPEVIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIGAGA 298
            PEV+  + IYSLD+G+LLAGT+YRGDFE+R K+++ +LE   DA+LFIDEIHT+IGAGA
Sbjct: 246 TPEVLSETTIYSLDMGALLAGTRYRGDFEERLKAVVTELEDHPDAVLFIDEIHTVIGAGA 305

Query: 299 ASGGQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTT 358
            SGG +DA+NL+KP L  GKLR +GSTTY+E+   FEK+RALSRRFQKID+ EPS++D+ 
Sbjct: 306 TSGGAMDASNLLKPALQGGKLRTMGSTTYKEFRQHFEKDRALSRRFQKIDVNEPSVEDSI 365

Query: 359 KILMGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLMPAS 418
           +IL GLK  +E HH +R+T+ A+++AVELSA+YIN+R LPDKAIDVIDEAGA   L+  S
Sbjct: 366 EILKGLKPYFEDHHGIRFTSDAIKSAVELSARYINDRKLPDKAIDVIDEAGAAQHLVVES 425

Query: 419 RRKKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIK 478
           +R+KT+GV EIE++VAK+ARIP K+VS  D ++LK+L++ +K +VFGQDAAID L+ AIK
Sbjct: 426 KRRKTIGVKEIEAVVAKIARIPPKNVSKDDAEVLKDLERSLKRVVFGQDAAIDALSSAIK 485

Query: 479 LTRAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERHSVSRLIG 538
           L RAGL    KP+G++LFAGPTGVGKTEV  QL+  LG+ELLRFDMSEY E+H+VSRLIG
Sbjct: 486 LARAGLREPEKPIGNYLFAGPTGVGKTEVAKQLADTLGVELLRFDMSEYMEKHAVSRLIG 545

Query: 539 APPGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKAD 598
           APPGYVG+DQGGLLTD V +HPH V+LLDEIEKAHPD+FN+LLQVMDNG LTD+NGR  +
Sbjct: 546 APPGYVGFDQGGLLTDGVDQHPHCVLLLDEIEKAHPDVFNILLQVMDNGQLTDHNGRTVN 605

Query: 599 FRNVILVMTTNAGVAETVKKSIGLIQQDNSHDAMSEIKKVFTPEFRNRLDHIIWFNSLDE 658
           FRNV+L+MT+NAG +E  K +IG  +     +  + I++ FTPEFRNRLD +I F  L +
Sbjct: 606 FRNVVLIMTSNAGASEQAKAAIGFGRDRREGEDTAAIERTFTPEFRNRLDAVISFAPLPK 665

Query: 659 RVIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKKP 718
            VI QVV+KF+++L+AQL  R VS+E++  A  WLA KGYD  MGARP+GRVIQE +KKP
Sbjct: 666 DVILQVVEKFVLQLEAQLMDRNVSIELTRKAAEWLADKGYDDRMGARPLGRVIQEHIKKP 725

Query: 719 LANELLFGSLVDGGTVKVTLSDDRL 743
           LA ELLFG L  GG VKV + D +L
Sbjct: 726 LAEELLFGKLAKGGLVKVGIKDGKL 750