Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 752 a.a., ATP-dependent Clp protease, ATP-binding subunit clpA (RefSeq) from Shewanella loihica PV-4

 Score = 1033 bits (2671), Expect = 0.0
 Identities = 519/746 (69%), Positives = 626/746 (83%), Gaps = 4/746 (0%)

Query: 1   MLNKELESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDT 60
           MLNK+LE +LN AF +ARD RHE+MTVEHLLLAL++N AA+EALLAC A++D LR E+ +
Sbjct: 1   MLNKDLEVTLNLAFQQARDARHEYMTVEHLLLALIDNPAAQEALLACGANLDKLREEVSS 60

Query: 61  FIDQTTPLIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHA 120
           FI+QTTP+I   ++ RETQPTL FQRVLQRAVFHVQSSGR+EVTGANVLVAIFSEQES A
Sbjct: 61  FIEQTTPIISDPNDDRETQPTLGFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120

Query: 121 AYLLKKNDISRLDIVNFISHGITKASNHSEDSSSDSFGSSDTSEEVSADERLESFATNLN 180
            YLL+  +I+RLD+VN+ISHG+++    +          S++ E      +L  F  NLN
Sbjct: 121 VYLLRNGEITRLDVVNYISHGVSRDELDNAQEPEQIEDHSESEER----SKLSQFTANLN 176

Query: 181 QLAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNVP 240
           + A++G IDPLIGR  E+ER+IQ+LCRRRKNNPLLVGEAGVGKTAIAEGLA+RIV   VP
Sbjct: 177 EEARKGNIDPLIGRSDEIERSIQILCRRRKNNPLLVGEAGVGKTAIAEGLAYRIVNDEVP 236

Query: 241 EVIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIGAGAAS 300
           EV+  + +YSLD+G+LLAGTKYRGDFEKRFKS+LK+L ++K AILFIDEIHTIIGAGAAS
Sbjct: 237 EVMADATVYSLDLGALLAGTKYRGDFEKRFKSLLKELSQDKHAILFIDEIHTIIGAGAAS 296

Query: 301 GGQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTKI 360
           GG +DA+NL+KPLLSSG LRC+GSTT+QEY +IFEK+RAL+RRFQK+DI EPS+ +TTKI
Sbjct: 297 GGVMDASNLLKPLLSSGHLRCMGSTTFQEYQSIFEKDRALARRFQKVDINEPSVAETTKI 356

Query: 361 LMGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLMPASRR 420
           L GLK+KYE HH VRYT  AL  A  L+ K+IN+RHLPDKAIDVIDEAGAR  + PAS+R
Sbjct: 357 LQGLKSKYEEHHGVRYTMAALSVAARLADKHINDRHLPDKAIDVIDEAGARMAMQPASKR 416

Query: 421 KKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIKLT 480
           KKT+G AEIES++AK+ARIPEK+VS++DKD+LKNL++ +KM+VFGQD AI+ L+ AI+L+
Sbjct: 417 KKTIGQAEIESIIAKIARIPEKTVSATDKDMLKNLERNLKMVVFGQDKAIEALSSAIRLS 476

Query: 481 RAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERHSVSRLIGAP 540
           R+GL   HKPVGSFLFAGPTGVGKTEVT QL+  L ++L+RFDMSEY E H+VSRLIGAP
Sbjct: 477 RSGLSGAHKPVGSFLFAGPTGVGKTEVTSQLASCLSLKLVRFDMSEYMESHTVSRLIGAP 536

Query: 541 PGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADFR 600
           PGYVGYDQGGLLTDAVIK+PH VVLLDEIEKAHPD++NLLLQVMD+GTLTDNNGRKADFR
Sbjct: 537 PGYVGYDQGGLLTDAVIKNPHCVVLLDEIEKAHPDVYNLLLQVMDHGTLTDNNGRKADFR 596

Query: 601 NVILVMTTNAGVAETVKKSIGLIQQDNSHDAMSEIKKVFTPEFRNRLDHIIWFNSLDERV 660
           +V LVMTTNAGV ETV+KSIG  QQD+S DA+SEI +VF+PEFRNRLD IIWFN LD  V
Sbjct: 597 HVTLVMTTNAGVQETVRKSIGFKQQDHSQDALSEINRVFSPEFRNRLDEIIWFNHLDMTV 656

Query: 661 IHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKKPLA 720
           I +VVDKF+VELQAQLD + V L+VS+DAR  LA KGYD+ MGARPM RV+ E +K+PLA
Sbjct: 657 IAKVVDKFLVELQAQLDEKSVVLDVSDDARTLLAEKGYDKAMGARPMARVVTEMIKRPLA 716

Query: 721 NELLFGSLVDGGTVKVTLSDDRLAFE 746
           +E+LFG L  GG   V +  D+L  +
Sbjct: 717 DEILFGKLEKGGVAHVDVDGDKLTIK 742