Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 848 a.a., Probable ATP-dependent protease ATP-binding subunit ClpC1 from Mycobacterium tuberculosis H37Rv

 Score =  505 bits (1300), Expect = e-147
 Identities = 305/819 (37%), Positives = 468/819 (57%), Gaps = 96/819 (11%)

Query: 17  ARDKRHEFMTVEHLLLALLEND--AAREALLACQADIDVLRRELDTFIDQTTPLIPKNDE 74
           AR   H ++  EH+LL L+      A ++L +    ++ +R +++  I Q      +   
Sbjct: 20  ARMLNHNYIGTEHILLGLIHEGEGVAAKSLESLGISLEGVRSQVEEIIGQG-----QQAP 74

Query: 75  TRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHAAYLLKKNDIS---- 130
           +     T   ++VL+ ++      G + +   ++L+ +  E E  AA +L K        
Sbjct: 75  SGHIPFTPRAKKVLELSLREALQLGHNYIGTEHILLGLIREGEGVAAQVLVKLGAELTRV 134

Query: 131 RLDIVNFISHGITKASNHSEDSSSDSFGSSDTSEEVSADERLESFATNLNQLAKQGQIDP 190
           R  ++  +S          E + + + G    S   S    L+ F  NL   A +G++DP
Sbjct: 135 RQQVIQLLS-----GYQGKEAAEAGTGGRGGESGSPSTSLVLDQFGRNLTAAAMEGKLDP 189

Query: 191 LIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNVPEVIQRSVIYS 250
           +IGR+KE+ER +QVL RR KNNP+L+GE GVGKTA+ EGLA  IV G VPE ++   +Y+
Sbjct: 190 VIGREKEIERVMQVLSRRTKNNPVLIGEPGVGKTAVVEGLAQAIVHGEVPETLKDKQLYT 249

Query: 251 LDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIGAGAASGGQVDAANLI 310
           LD+GSL+AG++YRGDFE+R K +LK++    D ILFIDE+HT++GAGAA G  +DAA+++
Sbjct: 250 LDLGSLVAGSRYRGDFEERLKKVLKEINTRGDIILFIDELHTLVGAGAAEGA-IDAASIL 308

Query: 311 KPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTKILMGLKTKYEA 370
           KP L+ G+L+ IG+TT  EY    EK+ AL RRFQ + + EP+++ T +IL GL+ +YEA
Sbjct: 309 KPKLARGELQTIGATTLDEYRKYIEKDAALERRFQPVQVGEPTVEHTIEILKGLRDRYEA 368

Query: 371 HHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARL----MPASRRKKTVGV 426
           HH V  T+ A+ AA  L+ +YIN+R LPDKAID+IDEAGAR R+     P   R+    +
Sbjct: 369 HHRVSITDAAMVAAATLADRYINDRFLPDKAIDLIDEAGARMRIRRMTAPPDLREFDEKI 428

Query: 427 AEI-----------------------ESMVAKMARIPEKSVSSSDKDILKNLD------- 456
           AE                        +++VA+ A   EK   S D D++  +D       
Sbjct: 429 AEARREKESAIDAQDFEKAASLRDREKTLVAQRAE-REKQWRSGDLDVVAEVDDEQIAEV 487

Query: 457 ------------------------QKMKMLVFGQDAAIDVLTEAIKLTRAGLGAEHKPVG 492
                                   +++   + GQ+ A+  +++AI+ TRAGL    +P G
Sbjct: 488 LGNWTGIPVFKLTEAETTRLLRMEEELHKRIIGQEDAVKAVSKAIRRTRAGLKDPKRPSG 547

Query: 493 SFLFAGPTGVGKTEVTLQLSKLL---GIELLRFDMSEYGERHSVSRLIGAPPGYVGYDQG 549
           SF+FAGP+GVGKTE++  L+  L      L++ DM E+ +R + SRL GAPPGYVGY++G
Sbjct: 548 SFIFAGPSGVGKTELSKALANFLFGDDDALIQIDMGEFHDRFTASRLFGAPPGYVGYEEG 607

Query: 550 GLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADFRNVILVMTTN 609
           G LT+ V + P SVVL DEIEKAH +I+N LLQV+++G LTD  GR  DF+N +L+ T+N
Sbjct: 608 GQLTEKVRRKPFSVVLFDEIEKAHQEIYNSLLQVLEDGRLTDGQGRTVDFKNTVLIFTSN 667

Query: 610 AGVAETVKKSIGLIQQ----DNSHDAM-----SEIKKVFTPEFRNRLDHIIWFNSLDERV 660
            G ++ + K +GL       +N ++ M      E+KK F PEF NR+D II F+ L    
Sbjct: 668 LGTSD-ISKPVGLGFSKGGGENDYERMKQKVNDELKKHFRPEFLNRIDDIIVFHQLTREE 726

Query: 661 IHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKKPLA 720
           I ++VD  I  +  QL ++ ++L +++ A+  LA +G+D  +GARP+ R IQ +++  L+
Sbjct: 727 IIRMVDLMISRVAGQLKSKDMALVLTDAAKALLAKRGFDPVLGARPLRRTIQREIEDQLS 786

Query: 721 NELLFGSLVDGGTVKVTLSD-------DRLAFEYFGTRE 752
            ++LF  +  G  V V + +       +   F + GTR+
Sbjct: 787 EKILFEEVGPGQVVTVDVDNWDGEGPGEDAVFTFTGTRK 825