Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 755 a.a., ATP-dependent Clp protease, ATP-binding subunit ClpA (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 1052 bits (2721), Expect = 0.0
 Identities = 530/743 (71%), Positives = 634/743 (85%), Gaps = 2/743 (0%)

Query: 1   MLNKELESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDT 60
           MLNK+LE +LN AF +AR+ RHE+MTVEHLLLAL++N AA+EAL+AC A++D LR E+ +
Sbjct: 1   MLNKDLEVTLNLAFQQAREARHEYMTVEHLLLALIDNPAAQEALIACGANLDKLRDEVAS 60

Query: 61  FIDQTTPLIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHA 120
           FI QTTP+I   D+ +ETQPTL FQRVLQRAVFHVQSSGR+EVTGANVLVAIFSEQES A
Sbjct: 61  FIQQTTPIIADMDDDKETQPTLGFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQA 120

Query: 121 AYLLKKNDISRLDIVNFISHGITKASNHSEDSSSDSFGSSDTSEEVSADERLESFATNLN 180
            YLL+++DISRLD+VNFISHG +K  N   D+  D   S + +E       L  FATNLN
Sbjct: 121 VYLLRRSDISRLDVVNFISHGFSK--NEDSDAHQDQERSEEQAEASEERSMLSQFATNLN 178

Query: 181 QLAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNVP 240
           QLAKQG IDPLIGRD+E+ER IQ LCRRRKNNPLLVGEAGVGKTAIAEGLA+RIV   VP
Sbjct: 179 QLAKQGVIDPLIGRDQEIERAIQTLCRRRKNNPLLVGEAGVGKTAIAEGLAYRIVNHQVP 238

Query: 241 EVIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIGAGAAS 300
           EV+ ++ +YSLD+GSLLAGTKYRGDFEKRFK++LK+L  +K AILFIDEIHTIIGAGAAS
Sbjct: 239 EVMAQATVYSLDLGSLLAGTKYRGDFEKRFKNLLKELSADKHAILFIDEIHTIIGAGAAS 298

Query: 301 GGQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTKI 360
           GG +DA+NL+KPLLSSG LRC+GSTT+QEY +IFEK+RAL+RRFQK+DI EPS+ +TTKI
Sbjct: 299 GGVMDASNLLKPLLSSGNLRCMGSTTFQEYQSIFEKDRALARRFQKVDINEPSVAETTKI 358

Query: 361 LMGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLMPASRR 420
           LMGLK+KYE +H VRYT  A+ +A  LSAK+IN+RHLPDKAIDVIDEAGAR  ++P S+R
Sbjct: 359 LMGLKSKYEEYHGVRYTQAAINSAAVLSAKHINDRHLPDKAIDVIDEAGARMAMLPQSKR 418

Query: 421 KKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIKLT 480
           KKT+G AEIE++VAK+ARIPEKSVS++DKD+L+NL++ +KM+VFGQD AI+ L+ AI+L+
Sbjct: 419 KKTIGQAEIETIVAKIARIPEKSVSATDKDLLRNLERNLKMVVFGQDKAIETLSSAIRLS 478

Query: 481 RAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERHSVSRLIGAP 540
           R+GLG + KPVGSFLFAGPTGVGKTEVT QL+  LG++L+RFDMSEY E H+VSRLIGAP
Sbjct: 479 RSGLGTDKKPVGSFLFAGPTGVGKTEVTNQLANCLGMKLVRFDMSEYMESHTVSRLIGAP 538

Query: 541 PGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADFR 600
           PGYVGYDQGGLLTDAVIK+PH VVLLDEIEKAHPD++NLLLQVMD+GTLTDNNGRKADFR
Sbjct: 539 PGYVGYDQGGLLTDAVIKNPHCVVLLDEIEKAHPDVYNLLLQVMDHGTLTDNNGRKADFR 598

Query: 601 NVILVMTTNAGVAETVKKSIGLIQQDNSHDAMSEIKKVFTPEFRNRLDHIIWFNSLDERV 660
           +V LVMTTNAGV ET++KSIG  QQD++ DA+SEI +VF+PEFRNRLD IIWFN LD  +
Sbjct: 599 HVTLVMTTNAGVQETIRKSIGFTQQDHTQDALSEINRVFSPEFRNRLDSIIWFNHLDMTI 658

Query: 661 IHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKKPLA 720
           I +VVDKF+VELQAQLDA+ V LEVS++AR  LA KGYD+ MGARPM RV+ E +K+PLA
Sbjct: 659 IAKVVDKFLVELQAQLDAKHVVLEVSDEARTLLAQKGYDKSMGARPMARVVTELIKRPLA 718

Query: 721 NELLFGSLVDGGTVKVTLSDDRL 743
           +ELLFG L  GG   V   D  +
Sbjct: 719 DELLFGELEHGGIAHVDAKDGEI 741