Pairwise Alignments

Query, 756 a.a., ATP-dependent Clp protease ATP-binding subunit ClpA from Vibrio cholerae E7946 ATCC 55056

Subject, 776 a.a., ATP-dependent Clp protease, ATP-binding subunit ClpA (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  777 bits (2007), Expect = 0.0
 Identities = 403/739 (54%), Positives = 528/739 (71%), Gaps = 9/739 (1%)

Query: 1   MLNKELESSLNGAFARARDKRHEFMTVEHLLLALLENDAAREALLACQADIDVLRRELDT 60
           M+ K L+++LN A    R + HE++T+EHLL A+   +  +  L  C AD+  LR  L+ 
Sbjct: 1   MIGKRLQAALNAAVGEVRVRNHEYLTLEHLLYAIAGEEQGKGILEGCGADVTALRARLEE 60

Query: 61  FIDQTTPLIPKNDETRETQPTLSFQRVLQRAVFHVQSSGRSEVTGANVLVAIFSEQESHA 120
           F       +P+ D T E   TL  QRVLQRA  H+QS+GR  V   +VL A+F E +++A
Sbjct: 61  FFGTHLESLPE-DMTTEVVQTLGVQRVLQRAFRHIQSAGRPLVEIGDVLAALFDEDDTYA 119

Query: 121 AYLLKKNDISRLDIVNFISHGITKASNHSEDSSSDSFGSSDTSEEVSADERLESFATNLN 180
            Y LK   +SRLD++ +ISH + +A + + D   +  G + T  +      L  +AT+L 
Sbjct: 120 VYFLKTQGVSRLDVLEYISHAMPEADDDAMDGDDEGDGGASTRADA-----LAQYATDLT 174

Query: 181 QLAKQGQIDPLIGRDKELERTIQVLCRRRKNNPLLVGEAGVGKTAIAEGLAWRIVEGNVP 240
             A++G+IDPLIGR+ ELERT+QVL RRRKNNPL VG+ GVGKTAIAEGLA RI  G VP
Sbjct: 175 ARAREGRIDPLIGREDELERTVQVLSRRRKNNPLFVGDPGVGKTAIAEGLALRIAVGAVP 234

Query: 241 EVIQRSVIYSLDIGSLLAGTKYRGDFEKRFKSILKQLEKEKDAILFIDEIHTIIGAGAAS 300
           E  +++ +Y+LD+GSLLAGTKYRGDFE R K+++ +L ++ DAILFIDEIHTI+GAGA S
Sbjct: 235 ESFRKARVYALDMGSLLAGTKYRGDFEARLKAVISELSRQPDAILFIDEIHTIVGAGATS 294

Query: 301 GGQVDAANLIKPLLSSGKLRCIGSTTYQEYSNIFEKERALSRRFQKIDIVEPSLDDTTKI 360
           GG +DA+N++KP+L+SG +RCIGSTT++EY N FEK+RALSRRFQKIDI EP+ ++  +I
Sbjct: 295 GGSMDASNILKPVLASGAIRCIGSTTHEEYRNHFEKDRALSRRFQKIDIGEPTQEECVEI 354

Query: 361 LMGLKTKYEAHHDVRYTNKALRAAVELSAKYINERHLPDKAIDVIDEAGARARLMPASRR 420
           L GLK  YE HH VRYT  ALRAAVELSA+Y+N+R LPDKAIDVIDEAGA  RL    + 
Sbjct: 355 LKGLKEHYEEHHAVRYTLPALRAAVELSARYVNDRLLPDKAIDVIDEAGAAMRLRAGFKP 414

Query: 421 KKTVGVAEIESMVAKMARIPEKSVSSSDKDILKNLDQKMKMLVFGQDAAIDVLTEAIKLT 480
             +V V ++E +VA+MA +P +S+SSSD+D LK L+  +   VFGQ+AA+ V+  +I   
Sbjct: 415 GASVSVQDVERVVARMAHVPPRSISSSDRDRLKTLENDLGKAVFGQEAAVAVVARSILRA 474

Query: 481 RAGLGAEHKPVGSFLFAGPTGVGKTEVTLQLSKLLGIELLRFDMSEYGERHSVSRLIGAP 540
           RAG G E +P GSFLF GPTGVGKTE+   L+K LG+  LR+DMSEY E+H+VSR IGAP
Sbjct: 475 RAGFGREDRPTGSFLFYGPTGVGKTELARSLAKRLGVAFLRYDMSEYMEKHAVSRFIGAP 534

Query: 541 PGYVGYDQGGLLTDAVIKHPHSVVLLDEIEKAHPDIFNLLLQVMDNGTLTDNNGRKADFR 600
           PGYVGYDQGG LT+AV + P++VVLLDE+EKAHPDIFN+LLQVMD  TLTDN GRKADFR
Sbjct: 535 PGYVGYDQGGQLTEAVRRTPYAVVLLDEMEKAHPDIFNVLLQVMDYATLTDNTGRKADFR 594

Query: 601 NVILVMTTNAGVAETVKKSIGLI---QQDNSHDAMSEIKKVFTPEFRNRLDHIIWFNSLD 657
           NV+L+MT+NAGV E    SIG      +D +      ++ +F+PEFRNRLD ++ F SL 
Sbjct: 595 NVVLIMTSNAGVREMSAPSIGFTGGGVEDVTAKGRKAVETLFSPEFRNRLDALVPFGSLA 654

Query: 658 ERVIHQVVDKFIVELQAQLDARGVSLEVSEDARHWLAVKGYDREMGARPMGRVIQEQLKK 717
             V+ ++VDKF+ E++  L  R V LE++  AR  LA KG+D   GARP+ RVI+  ++ 
Sbjct: 655 PEVMERIVDKFVREVENGLRERRVRLELTAAARQRLAEKGFDPAFGARPLRRVIRTAIED 714

Query: 718 PLANELLFGSLVDGGTVKV 736
            LA E+LFG L  GGTV V
Sbjct: 715 ELAKEMLFGRLRKGGTVHV 733