Pairwise Alignments

Query, 76 a.a., cold-shock protein CspD from Vibrio cholerae E7946 ATCC 55056

Subject, 69 a.a., cold shock domain family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 79.3 bits (194), Expect = 6e-21
 Identities = 37/66 (56%), Positives = 44/66 (66%)

Query: 3  SMATGTVKWFNNAKGFGFICPEGEDGDIFAHYSTIQMDGYRTLKAGQQVSYQVEQGPKGY 62
          S  TG VKWFN  KGFGFI P+    D F H+  I  DG++TL  GQ+VSY+VEQG KG 
Sbjct: 2  SKTTGVVKWFNEDKGFGFISPDNGGADAFVHFRAIVSDGFKTLAEGQKVSYEVEQGQKGP 61

Query: 63 HASCVV 68
           A+ VV
Sbjct: 62 QAANVV 67