Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 188 a.a., Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N2E2

 Score =  246 bits (629), Expect = 2e-70
 Identities = 114/179 (63%), Positives = 137/179 (76%)

Query: 61  PAERKVILFNKPYDTLSQFTDGDGRKTLADYIPIKDVYAAGRLDRDSEGLLILTNDGILQ 120
           PAE K+ILFNKP+D L+QF+DG+GR TL D+I +  +Y AGRLDRDSEGLL+LTNDG LQ
Sbjct: 6   PAEPKLILFNKPFDVLTQFSDGEGRATLKDFIDVPGIYPAGRLDRDSEGLLLLTNDGQLQ 65

Query: 121 ARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPTLWPRNPP 180
           AR+  P+ K  KTYWVQVEG P    L+ LR GV L DG TLPA+   + EP LWPRNPP
Sbjct: 66  ARIADPKHKLAKTYWVQVEGEPNAEQLQRLRDGVALNDGMTLPAEARQLDEPQLWPRNPP 125

Query: 181 VRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQPGEWREV 239
           VRFR ++PT+WL + + EGRNRQVRRMTA +G PTLRL+R  +GDW L  L  G+WREV
Sbjct: 126 VRFRKSVPTSWLELVIREGRNRQVRRMTAAVGLPTLRLVRVRIGDWTLEGLDQGQWREV 184