Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., Ribosomal large subunit pseudouridine synthase E (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N1B4

 Score =  249 bits (637), Expect = 2e-71
 Identities = 121/208 (58%), Positives = 151/208 (72%), Gaps = 4/208 (1%)

Query: 32  PPTRANRKSVANKKKNATQTALSPKRPLSPAERKVILFNKPYDTLSQFTDGDGRKTLADY 91
           PP   +R+  AN  ++A +     K P  PAE K+ILFNKP+D L+QF+DG+GR TL D+
Sbjct: 4   PPRPVSRRPGANNPQSAPRRLA--KAP--PAEPKLILFNKPFDVLTQFSDGEGRATLKDF 59

Query: 92  IPIKDVYAAGRLDRDSEGLLILTNDGILQARLTQPQSKAPKTYWVQVEGSPQESDLEALR 151
           I I  +Y AGRLDRDSEGLL+LTNDG LQAR+  P+ K  KTYWVQVEG P    L+ LR
Sbjct: 60  IEIPGIYPAGRLDRDSEGLLLLTNDGQLQARIADPKHKLAKTYWVQVEGEPSAEQLQRLR 119

Query: 152 HGVTLKDGPTLPAKVDIMPEPTLWPRNPPVRFRAAIPTTWLAITLMEGRNRQVRRMTAHI 211
            GV L DG TLPA+   + EP LWPRNPPVRFR ++PT+WL + + EGRNRQVRRMTA +
Sbjct: 120 DGVELNDGMTLPAQARQLDEPQLWPRNPPVRFRKSVPTSWLELVIREGRNRQVRRMTAAV 179

Query: 212 GFPTLRLIRYSMGDWNLGDLQPGEWREV 239
           G PTLRL+R  +GDW++  L  G+W+EV
Sbjct: 180 GLPTLRLVRVRIGDWSIEGLDQGQWKEV 207