Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., Pseudouridylate synthase from Xanthomonas campestris pv. campestris strain 8004

 Score = 92.4 bits (228), Expect = 8e-24
 Identities = 66/189 (34%), Positives = 90/189 (47%), Gaps = 22/189 (11%)

Query: 57  RPLSPAERKVILFNKPYDTLSQFTDGDGRKTLA---DYIPIKDVYAAGRLDRDSEGLLIL 113
           +PL+   R  ++ NKP   ++   D  GR T+    D   +  +   GRLD+ SEGLL+ 
Sbjct: 88  QPLAGPARLYLMLNKPRGVVTTVRDEQGRDTVYRCFDGAGLPWLAPVGRLDKASEGLLLF 147

Query: 114 TNDGILQARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVT----LKDGPTLPAKVDIM 169
           +ND    A +T P +   KTY VQV+  P    L  +  GV       DG  L AK    
Sbjct: 148 SNDPQWAAAVTDPATGPDKTYHVQVDCRPDALQLARMHDGVADTDPESDGSLLRAK---- 203

Query: 170 PEPTLWPRNPPVR-FRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNL 228
                      VR  R      WL I L EGRNRQ+RR+ A +    LRL+R ++G   +
Sbjct: 204 ----------QVRVLREGERNAWLEIVLDEGRNRQIRRLLAALEIGVLRLVRVAIGPLAM 253

Query: 229 GDLQPGEWR 237
           G+L  G WR
Sbjct: 254 GELGKGSWR 262