Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 199 a.a., Pseudouridine synthase, Rsu from Synechococcus elongatus PCC 7942

 Score =  193 bits (491), Expect = 2e-54
 Identities = 99/184 (53%), Positives = 127/184 (69%), Gaps = 8/184 (4%)

Query: 65  KVILFNKPYDTLSQFTDGD--GRKTLADYIPIKDVYAAGRLDRDSEGLLILTNDGILQAR 122
           + +LF+KPYD L QF+  D   ++TL DYI + +VY  GRLDRDSEGLL+LTN+G LQ R
Sbjct: 4   RYLLFHKPYDVLCQFSPSDRPDQQTLKDYIDVPEVYPVGRLDRDSEGLLLLTNNGALQHR 63

Query: 123 LTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPTLWPRNPPVR 182
           L  P+    +TYWVQVE  P E+ L+ALR GV ++D  T PAKV  + +P +  R+PP+R
Sbjct: 64  LCHPRFGHDRTYWVQVEREPTEAALQALRQGVQIQDYRTRPAKVQRLDDPQIPERDPPIR 123

Query: 183 FRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMG------DWNLGDLQPGEW 236
           FR  +PT WLA+TL EGRNRQVRRMTA +G PTLRLIR ++          L  L PG W
Sbjct: 124 FRKTVPTAWLALTLQEGRNRQVRRMTAAVGHPTLRLIRAAIATHPDQPPLQLQGLAPGTW 183

Query: 237 REVT 240
           R++T
Sbjct: 184 RDLT 187