Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., ribosomal large subunit pseudouridine synthase B from Synechococcus elongatus PCC 7942

 Score =  121 bits (304), Expect = 1e-32
 Identities = 75/187 (40%), Positives = 101/187 (54%), Gaps = 17/187 (9%)

Query: 57  RPLSPAERKVILFNKPYDTLSQFTDGDGRKTLADYIPIK---DVYAAGRLDRDSEGLLIL 113
           RP    E + +L +KP   +S   D   R+T+ D +  +    ++  GRLD DS GLL+L
Sbjct: 57  RPKHRPEARYLLLHKPVGVVSTCRDPQRRRTVIDLVDPEFRPGLHPVGRLDTDSSGLLLL 116

Query: 114 TNDGILQARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPT 173
            NDG L  +++ P+    KTY V VEG P  S LE  R GV L D  TLPA V I+ +  
Sbjct: 117 CNDGELTYQISHPRFHIEKTYRVWVEGHPPASVLEHWRSGVWLDDYQTLPAGVRILHD-- 174

Query: 174 LWPRNPPVRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQP 233
                          +T L + L EGRNRQ+RR+   +G P LRL R ++G   LG LQP
Sbjct: 175 ------------RAESTLLEVILHEGRNRQIRRVAEQLGHPVLRLTRVAIGPLRLGSLQP 222

Query: 234 GEWREVT 240
           GE+R +T
Sbjct: 223 GEYRSLT 229