Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 320 a.a., ribosomal large subunit pseudouridine synthase B from Sinorhizobium meliloti 1021

 Score =  100 bits (248), Expect = 5e-26
 Identities = 67/181 (37%), Positives = 95/181 (52%), Gaps = 19/181 (10%)

Query: 64  RKVILFNKPYDTLSQFTDGDGRKTL---ADYIPIKDVYAAGRLDRDSEGLLILTNDGILQ 120
           R  ++ NKP   ++   D +GR T+    D + +  +   GRLD+ SEGLL+ TND +L 
Sbjct: 142 RVYLMLNKPRGLVTTRDDPEGRPTVFSCLDNVDVPSLSPVGRLDKASEGLLLFTNDTVLA 201

Query: 121 ARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPA-KVDIMPEPTLWPRNP 179
            RL  P++   K Y VQV G   E+    +  GVT + G  L A +V+            
Sbjct: 202 QRLLDPETHLGKVYHVQVRGIFGEAMAARMVEGVT-EGGELLRALRVE------------ 248

Query: 180 PVRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQPGEWREV 239
             R +     +W+ I L EGRNRQ+RRM   +GF  LRL+R S+G+  LGDL  G  R +
Sbjct: 249 --RLKGGDRNSWIEIELDEGRNRQIRRMLDVLGFECLRLLRVSIGEIRLGDLPKGASRPL 306

Query: 240 T 240
           T
Sbjct: 307 T 307