Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., pseudouridine synthase, Rsu (RefSeq) from Shewanella amazonensis SB2B

 Score = 89.0 bits (219), Expect = 8e-23
 Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 9/184 (4%)

Query: 58  PLSPAERKV-ILFNKPYDTLSQFTDGDGRKTLADYIPIKDVYAAGRLDRDSEGLLILTND 116
           PL PA+ K   L++KP     +    D    +        ++ AGRLD+DS GLL+LTND
Sbjct: 61  PLCPAQAKAYFLYHKPVGIDCRLRAEDPHSLIHCLPGDLRLFPAGRLDKDSRGLLLLTND 120

Query: 117 GILQARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPTLWP 176
           G L  RL  P     K Y + +  +PQ  D+ A+  G    +GPT P  V+   +     
Sbjct: 121 GELTQRLMHPDFHHQKGYLITLNKAPQPDDIAAIAAGFDYGEGPTRPCVVEAAIDCGYAT 180

Query: 177 RNPPVRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQPGEW 236
            +   R         L + L EG+ RQ+RR+    G+  L L+R S+   N+G L+ GE 
Sbjct: 181 EDGNPR--------KLRMRLTEGKKRQIRRLWRARGYRVLDLLRESIQQLNIGKLEQGEI 232

Query: 237 REVT 240
           R +T
Sbjct: 233 RSLT 236