Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 199 a.a., Pseudouridine synthase, Rsu (NCBI) from Rhodospirillum rubrum S1H

 Score =  220 bits (560), Expect = 2e-62
 Identities = 107/178 (60%), Positives = 134/178 (75%), Gaps = 2/178 (1%)

Query: 65  KVILFNKPYDTLSQFTD-GDGRKTLADYIPIKDVYAAGRLDRDSEGLLILTNDGILQARL 123
           ++IL NKPYD LSQFTD  +GR TLA  +PI  VY  GRLDRDSEGLL+LT++G LQ  +
Sbjct: 3   RLILLNKPYDVLSQFTDRAEGRATLASLVPIPGVYVCGRLDRDSEGLLLLTDNGPLQHHI 62

Query: 124 TQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPT-LWPRNPPVR 182
           + P+SK PKTY  QVEG   ++ L+ LR GVTL+DGP     V+ + EP  LWPR+PP+R
Sbjct: 63  SHPRSKVPKTYRAQVEGVADKAALDRLRQGVTLRDGPARAVTVEAIDEPAGLWPRDPPIR 122

Query: 183 FRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQPGEWREVT 240
           +RA IPT+W+ +T+ EGRNR VRRMTA +G PTLRLIR+S+GDW L +L PG WRE T
Sbjct: 123 WRANIPTSWIELTIDEGRNRMVRRMTAAVGLPTLRLIRWSIGDWTLENLPPGSWREET 180