Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., pseudouridine synthase family protein from Dechlorosoma suillum PS

 Score = 84.0 bits (206), Expect = 4e-21
 Identities = 60/181 (33%), Positives = 88/181 (48%), Gaps = 20/181 (11%)

Query: 65  KVILFNKPYDTLSQFTDGDGRKTLADYIPI---KDVYAAGRLDRDSEGLLILTNDGILQA 121
           +V+L++KP   +    D +GR ++ D++P        A GRLD ++ GLL+ TN G L  
Sbjct: 188 RVVLYHKPEGQIVSRDDPEGRDSVFDFLPRMRGSRWVAVGRLDYNTSGLLLFTNSGDLAN 247

Query: 122 RLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPT-LPAKVDIMPEPTLWPRNPP 180
           RL  P+    + Y V+V G   ++ L+ L  G+ L+DGP      +D   E         
Sbjct: 248 RLMHPRYNLEREYAVRVLGDLDDATLKQLAAGIELEDGPARFTTLLDAGGEGA------- 300

Query: 181 VRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNL-GDLQPGEWREV 239
                     W  +TL EGRNR+VRRM   +G    RLIR   G + L   L+ G   E+
Sbjct: 301 --------NHWYRVTLSEGRNREVRRMFEAVGATVSRLIRVRYGPFVLPARLKRGSTMEL 352

Query: 240 T 240
           T
Sbjct: 353 T 353