Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 177 a.a., pseudouridine synthase from Dyella japonica UNC79MFTsu3.2

 Score =  198 bits (503), Expect = 7e-56
 Identities = 100/175 (57%), Positives = 127/175 (72%), Gaps = 1/175 (0%)

Query: 66  VILFNKPYDTLSQFTDGDGRKTLADYIPIKDVYAAGRLDRDSEGLLILTNDGILQARLTQ 125
           ++  NKP++ L QF+    ++TLA+++  K+VY AGRLD DSEGLL+LT+DG L  +LT 
Sbjct: 2   LLALNKPFNVLCQFSPEGDKRTLAEFVRQKEVYPAGRLDYDSEGLLLLTDDGRLAHQLTD 61

Query: 126 PQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKVDIMPEPT-LWPRNPPVRFR 184
           P+ K PKTY VQV+G+  +  +  LR GV L DGPTLPA V+   EP  LWPR+PPVRFR
Sbjct: 62  PRHKQPKTYLVQVDGAITDEAVAQLRRGVALNDGPTLPAGVEHAVEPQWLWPRDPPVRFR 121

Query: 185 AAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNLGDLQPGEWREV 239
             IPT+W+ +TL EGRNRQVRRMTA  GFPTLRLIR S+G + L  L PGE R +
Sbjct: 122 KNIPTSWITVTLREGRNRQVRRMTAAAGFPTLRLIRVSVGGYALDGLAPGETRVI 176