Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 258 a.a., pseudouridine synthase from Dyella japonica UNC79MFTsu3.2

 Score =  112 bits (280), Expect = 7e-30
 Identities = 72/194 (37%), Positives = 100/194 (51%), Gaps = 17/194 (8%)

Query: 50  QTALSPKRPLSPAERKVILFNKPYDTLSQFTDGDGRKTLADYIP---IKDVYAAGRLDRD 106
           Q  L    P+  A+R  I  NKP   +    D  GR T+ D +    +  +   GRLD+ 
Sbjct: 70  QRILLDGEPVGEAKRVYIALNKPRGIVVSAADERGRDTVYDLLKDAGLPWLGPVGRLDKA 129

Query: 107 SEGLLILTNDGILQARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKV 166
           SEGLL+L+ND    ARLT+P+    KTY VQ++  P  + LE L  GV +++G  L AK 
Sbjct: 130 SEGLLLLSNDSAWAARLTEPRQHVDKTYHVQIDAMPDAALLERLAQGV-VEEGERLAAKQ 188

Query: 167 DIMPEPTLWPRNPPVRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDW 226
            ++              RA     WL I L EGRNR +RR+ A      LRLIR ++G  
Sbjct: 189 AVL-------------LRAGEKNAWLEIVLDEGRNRHIRRLLAAHDIGVLRLIRVAIGSL 235

Query: 227 NLGDLQPGEWREVT 240
            LG+L  G+WR ++
Sbjct: 236 PLGELAKGQWRHLS 249