Pairwise Alignments

Query, 241 a.a., 23S rRNA pseudouridine synthase E from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., pseudouridine synthase from Burkholderia phytofirmans PsJN

 Score = 84.7 bits (208), Expect = 4e-21
 Identities = 64/189 (33%), Positives = 90/189 (47%), Gaps = 20/189 (10%)

Query: 56  KRPLSPAERKVILFNKPYDTLSQFTDGDGRKTLADYIPIKDV---YAAGRLDRDSEGLLI 112
           KR L+    +V+L++KP   +    D +GR ++ D +P        A GRLD ++EGLL+
Sbjct: 265 KRKLANKPPRVLLYHKPTGEIVSHADPEGRASVFDNLPPMKTAKWLAVGRLDFNTEGLLM 324

Query: 113 LTNDGILQARLTQPQSKAPKTYWVQVEGSPQESDLEALRHGVTLKDGPTLPAKV-DIMPE 171
           LT  G L  R   P+    + Y V+V G   E   + L +GV L+DGP    ++ D   E
Sbjct: 325 LTTSGDLANRFMHPRYSVEREYAVRVVGELAEGMRQKLLNGVELEDGPANFLRIRDGGGE 384

Query: 172 PTLWPRNPPVRFRAAIPTTWLAITLMEGRNRQVRRMTAHIGFPTLRLIRYSMGDWNL-GD 230
            T                 W  + L EGRNR+VRRM    G    RLIR   G  +L   
Sbjct: 385 GT---------------NHWYHVALAEGRNREVRRMFEAAGLMVSRLIRTRHGPISLPKG 429

Query: 231 LQPGEWREV 239
           L+ G W E+
Sbjct: 430 LKRGRWEEL 438