Pairwise Alignments

Query, 245 a.a., 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., hisF protein (cyclase) (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 58.5 bits (140), Expect = 1e-13
 Identities = 52/240 (21%), Positives = 107/240 (44%), Gaps = 16/240 (6%)

Query: 2   IIPALDLIEGQVVRLYQGDYGQVTEYKVDPAEQFNLYHQAGAGWLHLVDLTGAKNTAARQ 61
           I+P LD+ +G VV+  Q    ++    V  A +   Y   GA  L   D+T + +     
Sbjct: 6   IVPCLDVKDGCVVKGVQFRNHEIVGDIVPLAAR---YAAEGADELVFYDITASAHDRVVD 62

Query: 62  LNLIARLLASTPANIQIGGGVRSEQDVVDLLEAGAQRVVVGSTAVKQPQLVKSWIEKYGA 121
            + ++R+         + GG+++     +LL  GA ++ V S A+  P L+    +++G 
Sbjct: 63  KSWVSRVAEQIDIPFCVAGGIKTITQARELLAFGADKISVNSPALSDPSLISRLQDEFGR 122

Query: 122 EKIVLALDINIDEQGTRKVAISGWQEDSGVTIEAL------IDDYLTVGLQHVLCTDISR 175
           + IV+ +D +  +  +    +  +  D   T E        +++    G   ++   +++
Sbjct: 123 QCIVIGID-SFYDAASDSYKVKQFTGDEAATKETAWYTQDWVEEVQKRGCGEIVLNVMNQ 181

Query: 176 DGTLAGSNVELYRDLCRQYPQVQFQSSGGIGSLAD-----IEALKGTGVAGVIVGRALLD 230
           DG   G +++    L RQ   V   +SGG G++A      I+A     +A  +  +A+++
Sbjct: 182 DGVRGGYDIK-QLSLVRQLCDVPLIASGGAGTMAHFRDVFIDAKVDAALAASVFHKAIIN 240