Pairwise Alignments

Query, 533 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  230 bits (587), Expect = 7e-65
 Identities = 161/500 (32%), Positives = 259/500 (51%), Gaps = 62/500 (12%)

Query: 11  LSVLPPLVALSLAIVTRRVLLSLGVGIFLGALLLADYSIGQSLQYIATQVGSVFVKEGAI 70
           +S++PP V L+LAI  RR +L+L +G   G LLL   S+          +G+    + ++
Sbjct: 7   ISLIPPFVVLALAIWLRRPILALIIGAVAGLLLLDPSSV----------LGNF--ADASL 54

Query: 71  NAWNMSIVGFLLLL----GMMTALLTLSGGTRAFAQWAQVRVKSKRGSKLLAAFLGVFIF 126
                  +G+L+L+    G + ALL  +GG  AF + A +  K ++ S  +   LG+ IF
Sbjct: 55  KVMQDETIGWLILVCGSFGALIALLVRTGGALAFGRKAILMAKGRKSSLFMTFVLGLVIF 114

Query: 127 VDDYFNSLAVGSISRPVTDRFYVSRAKLAYILDSTAAPMCVVMPASSWGAYIMTIIGGIL 186
           +DDY N+L VG   + VTD+F VSR  LAY++DSTAAP+CV++P S+W  +     GG+L
Sbjct: 115 IDDYLNALTVGETMKRVTDKFKVSREMLAYVVDSTAAPVCVLVPLSTWAVF----FGGLL 170

Query: 187 VSHGI-EEYSALGAYLRLVPMNFYAIFALLMV-FAVVWFQMDIGQMRKHEIAASQGR--- 241
           V +G+  E  A+  Y+  +P   YA  A++MV   VV     IG M+K E+AA+QG    
Sbjct: 171 VDNGVAAEGEAISVYMSAIPYMLYAWLAVIMVLLVVVGVVPAIGPMKKAELAAAQGEPAK 230

Query: 242 ---GFDEDPSTDTQEAHELNEELDIRESERGTVLDLVLPIVFLVVATIGAMIWTGASALA 298
               ++E  ++D      + +E +    + G + + ++P+  LV  T+            
Sbjct: 231 AQVDWEEVHTSDEYAVKAIEDEFE-HADKHGKLHNFLVPLGLLVAFTV------------ 277

Query: 299 ESGQSFDIFGAFENTNVGTSLVYGGLVGLAMAFVTVLRQKL-PTAEIAKTLWIGAKSMFG 357
                FDI            +  G L  LA+       QKL P +E+   +  G KSM  
Sbjct: 278 ----YFDI-----------DVWKGLLATLAVTLPYYAVQKLMPMSEMMDQMIDGFKSMLP 322

Query: 358 AILILIFAWTIGSVIGDMKTGAYLSSLVQGNIDPHWLPVILFVLSGAMAFSTGTSWGTFG 417
           AI  ++ A+    V   +    Y+   +   +    LP I+F+    +AF+TG+SWG F 
Sbjct: 323 AIGTVVAAFIFKDVCDQLLLPQYVIDTLSPYMTAKMLPAIVFLAMAVLAFATGSSWGIFA 382

Query: 418 IMLPIAGDMAGA--TDIALMLPMLGAVLAGSVFGDHCSPISDTTILSSTGARCHHIDHVA 475
           + +PI   +A A   D AL   ++GA+L+ S FG      SD+T+L++ G+ C+ + H  
Sbjct: 383 VTIPIVMPLANAVGADTAL---VIGALLSASSFGSQACFYSDSTVLAAQGSGCNLVSHAV 439

Query: 476 TQLPYALAVALVSAIGYVVL 495
           TQLPYAL  A ++ +G+++L
Sbjct: 440 TQLPYALIAAALAFVGFILL 459