Pairwise Alignments

Query, 533 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella loihica PV-4

 Score =  578 bits (1489), Expect = e-169
 Identities = 294/518 (56%), Positives = 375/518 (72%), Gaps = 6/518 (1%)

Query: 1   MNLIDFASSPLSVLPPLVALSLAIVTRRVLLSLGVGIFLGALLLADYSIGQSLQYIATQV 60
           M  + +A S LS+LPP+VA+ LAI TRRVLLSLGVGI LGALL+AD+S     QY+  QV
Sbjct: 1   MTTLSYADSALSLLPPVVAILLAIFTRRVLLSLGVGILLGALLIADFSPLDMGQYLGQQV 60

Query: 61  GSVFVKEGAINAWNMSIVGFLLLLGMMTALLTLSGGTRAFAQWAQVRVKSKRGSKLLAAF 120
             +F  +GA+N+WN+ ++GFL+LLGM+TAL+T+SG  +AFA WA+  +++KR +KLL  F
Sbjct: 61  VGLFWDDGALNSWNVYLLGFLILLGMITALITVSGAAKAFADWARQHIRNKRDAKLLTMF 120

Query: 121 LGVFIFVDDYFNSLAVGSISRPVTDRFYVSRAKLAYILDSTAAPMCVVMPASSWGAYIMT 180
           LG  +F+DDYFNSL VGS++RP+TDR+Y+SR+KLAY+LDSTAAP+CV+ P SSWGAYI+ 
Sbjct: 121 LGCVVFIDDYFNSLVVGSVARPLTDRYYISRSKLAYLLDSTAAPICVISPVSSWGAYIIA 180

Query: 181 IIGGILVSHGIEEYSALGAYLRLVPMNFYAIFALLMVFAVVWFQMDIGQMRKHEIAASQG 240
           +IGGIL +HG  +   L  +++++PMNFYAIFAL+++  V +  +D+G MR+HE+ A +G
Sbjct: 181 LIGGILTAHGFTDSGHLSVFIQMIPMNFYAIFALVLLLCVAFMGLDVGPMRQHELNAQKG 240

Query: 241 RGFDEDPSTDTQEAHELNEELDIRESERGTVLDLVLPIVFLVVATIGAMIWTGASALAES 300
             +DE                D+ E++ G +L L LPI  LV ATI  MI +GA ALA  
Sbjct: 241 NLYDEAKGLPP------GANSDLPEADSGKILGLFLPITVLVFATIYFMIGSGADALAAE 294

Query: 301 GQSFDIFGAFENTNVGTSLVYGGLVGLAMAFVTVLRQKLPTAEIAKTLWIGAKSMFGAIL 360
              F + GAFE T+V +SL +G +VGLA   V V+ Q L  A I K +  GA+SM  AI 
Sbjct: 295 NLPFSVIGAFEKTDVASSLFFGAVVGLAATLVLVVSQGLDKALIFKGVIAGARSMLPAIY 354

Query: 361 ILIFAWTIGSVIGDMKTGAYLSSLVQGNIDPHWLPVILFVLSGAMAFSTGTSWGTFGIML 420
           IL+FAWTI  VIG M+TG Y++SL  GNI    LP +LFVL+G  AFSTGTSWGTFGIML
Sbjct: 355 ILLFAWTIAGVIGQMETGKYMASLATGNIPFALLPAVLFVLAGLTAFSTGTSWGTFGIML 414

Query: 421 PIAGDMAGATDIALMLPMLGAVLAGSVFGDHCSPISDTTILSSTGARCHHIDHVATQLPY 480
           PIA DMA  T   +MLPML +VLAG+VFGDHCSPISDTTILSSTGA CHHIDHV TQLPY
Sbjct: 415 PIAADMAMGTHTNMMLPMLASVLAGAVFGDHCSPISDTTILSSTGANCHHIDHVLTQLPY 474

Query: 481 ALAVALVSAIGYVVLGIFASLGLALAAASVSFVVVCLI 518
           AL VA +S +GY VLG   S+G  LAA S  FVV  L+
Sbjct: 475 ALIVAGISLVGYTVLGFTESVGAGLAACSALFVVSVLV 512