Pairwise Alignments

Query, 533 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella loihica PV-4

 Score =  234 bits (596), Expect = 7e-66
 Identities = 166/504 (32%), Positives = 259/504 (51%), Gaps = 64/504 (12%)

Query: 8   SSPLSVLPPLVALSLAIVTRRVLLSLGVGIFLGALLLADYSIGQSLQYIATQVGSVFVKE 67
           ++ LS++PP+V L LA+  RR +LSL +G  +G +L   Y   Q L   +    SV   E
Sbjct: 4   ATALSLIPPVVVLVLAVWLRRPILSLIIGALVGLVL---YQPDQVLNNFSDISLSVMADE 60

Query: 68  GAINAWNMSIVGFLLLL----GMMTALLTLSGGTRAFAQWAQVRVKSKRGSKLLAAFLGV 123
                     +G+L+L+    G + ALL  +GG+ AF + A    K  + S L+   LGV
Sbjct: 61  ---------TIGWLILVCGGFGALIALLVKTGGSMAFGRHALKYAKGPKSSLLMTFILGV 111

Query: 124 FIFVDDYFNSLAVGSISRPVTDRFYVSRAKLAYILDSTAAPMCVVMPASSWGAYIMTIIG 183
            IF+DDY N+L VGS  + VTD+F VSR  LAY++DSTAAP+CV++P S+W  +     G
Sbjct: 112 VIFIDDYLNALTVGSTMKSVTDKFKVSREMLAYVVDSTAAPICVLVPLSTWAVF----FG 167

Query: 184 GILVSHGIE-EYSALGAYLRLVPMNFYAIFALLMVFAVV-WFQMDIGQMRKHEIAASQGR 241
           G+LV +G+  E   +  Y+  +P   YA  A+ MV  V+       G M+K ++AA  G+
Sbjct: 168 GLLVDNGVAGEGQGISVYMSAIPYMLYAWLAVAMVLLVILGIVPAFGPMKKAQLAAMAGK 227

Query: 242 ------GFDEDPSTDTQEAHELNEELDIRESERGTVLDLVLPIVFLVVATIGAMIWTGAS 295
                   DE  ++D      + EE        G + + ++PI+ LV  T+   I     
Sbjct: 228 PAKAVDAIDEVQTSDDYSVKAIEEEFK-HADNLGKLHNFMVPIILLVGFTVYFDI----- 281

Query: 296 ALAESGQSFDIFGAFENTNVGTSLVYGGLVGLAMAFVTVLRQKLPTAEIAKTLWIGAKSM 355
                    D+      T   T   YG            +++ +P +E+ + +  G KSM
Sbjct: 282 ---------DVLKGLIATLAVTLPYYG------------VQRLMPLSEMMEQMLDGFKSM 320

Query: 356 FGAILILIFAWTIGSVIGDMKTGAYLSSLVQGNIDP----HWLPVILFVLSGAMAFSTGT 411
             AI  +I A+    V  D+     L   V GN+ P     WLP ++F+    +AF+TG+
Sbjct: 321 LPAIGTVIAAF----VFKDVCDKLMLPQYVIGNLSPFMTSQWLPAVVFLTMSILAFATGS 376

Query: 412 SWGTFGIMLPIAGDMAGATDIALMLPMLGAVLAGSVFGDHCSPISDTTILSSTGARCHHI 471
           SWG F + +PI   +A A +  + L ++GA+L+ S FG      SD+T+L++ G+ C+ +
Sbjct: 377 SWGIFAVSIPIVMPLAQAVNADIPL-VIGALLSASSFGSQACFYSDSTVLAAQGSDCNLV 435

Query: 472 DHVATQLPYALAVALVSAIGYVVL 495
            H  TQLPYAL  A ++ IG+++L
Sbjct: 436 SHAVTQLPYALLAAGLTFIGFLIL 459