Pairwise Alignments

Query, 533 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 506 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella loihica PV-4

 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 66/260 (25%), Positives = 119/260 (45%), Gaps = 40/260 (15%)

Query: 245 EDPSTDTQEAHELNEELDIRESERGTVLDLVLPIVFLVVATIGAMIWTGASALAESGQSF 304
           E P  D+  A         +  ++ T+LD ++PI+ LV       + T +  L  S  S+
Sbjct: 9   EQPGRDSSPA-------SAKRHKQPTLLDALIPIIALVC------MLTASVYLFSSDSSY 55

Query: 305 DIFGAFENTNVGTSLVYGGLVGLAMAFVTVLRQKLPTAEIAKTLWIGAKSMFGAILILIF 364
              GA +      +L+    + L +        K   A I K++ +      GA+LIL  
Sbjct: 56  ---GANQ-----IALIMAACITLVIGVKNGYSWKEMEAGIVKSVSLAT----GALLIL-- 101

Query: 365 AWTIGSVIGDMKTGAYLSSLV---QGNIDPHWLPVILFVLSGAMAFSTGTSW---GTFGI 418
            +++GS+IG       + +++      ++P +      +L   +A S G+SW   GT GI
Sbjct: 102 -FSVGSLIGTWILAGTVPTMIFYGMKILNPDYFYAASCLLCAVVALSIGSSWTVAGTLGI 160

Query: 419 -MLPIAGDMAGATDIALMLPMLGAVLAGSVFGDHCSPISDTTILSSTGARCHHIDHVATQ 477
            ++ +AG M  + +I       GA+++G+ FGD  SP+SDTT L+   A      H+   
Sbjct: 161 ALIGVAGAMGLSVEITA-----GAIISGAYFGDKMSPMSDTTNLAPAVAGSELFGHIRHM 215

Query: 478 LPYALAVALVSAIGYVVLGI 497
           +       L++ IG++ +G+
Sbjct: 216 VWTTTPSILLALIGFLFIGL 235