Pairwise Alignments

Query, 533 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 526 a.a., hypothetical Na+/H+ antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  537 bits (1383), Expect = e-157
 Identities = 280/535 (52%), Positives = 380/535 (71%), Gaps = 12/535 (2%)

Query: 1   MNLIDFASSPLSVLPPLVALSLAIVTRRVLLSLGVGIFLGALLLADYSIGQSLQYIATQV 60
           M +  FA S  SVLPPL+A++LAI+TRRVLLSLGVGI  G+LLL  +S   SL Y+   V
Sbjct: 1   MEISHFADSGWSVLPPLLAVALAIITRRVLLSLGVGIVAGSLLLNQFSPFDSLHYMFNTV 60

Query: 61  GSVFVKEGAINAWNMSIVGFLLLLGMMTALLTLSGGTRAFAQWAQVRVKSKRGSKLLAAF 120
             +F  +GA+N  N++++ F+LLLG + +L+++SG TRAFA+WA  R K++RG+K L   
Sbjct: 61  LRIFWVDGALNRDNINMLLFMLLLGGLISLMSVSGATRAFAEWAAKRAKTRRGAKGLTGI 120

Query: 121 LGVFIFVDDYFNSLAVGSISRPVTDRFYVSRAKLAYILDSTAAPMCVVMPASSWGAYIMT 180
           +    F+DD+F+SL+VG+I RPVTDRF +SRAKLAY+LDSTAAP+CV+MP SSWGAYI+ 
Sbjct: 121 MVFAFFIDDFFHSLSVGAICRPVTDRFQISRAKLAYLLDSTAAPVCVLMPISSWGAYIIA 180

Query: 181 IIGGILVSHGIEEYSALGAYLRLVPMNFYAIFALLMVFAVVWFQMDIGQMRKHEIAASQG 240
           ++GGI+ +HGI + S + A++ ++PMN YA+F LLMV  V+ FQ+DIG MR HE  A QG
Sbjct: 181 LVGGIMAAHGITDQSPISAFVEMIPMNLYAVFTLLMVLVVIAFQLDIGSMRWHEERALQG 240

Query: 241 RGFDEDPSTDTQEAHELNEELDIRESERGTVLDLVLPIVFLVVATIGAMIWTGASALAES 300
           + +DE       +   +  +++  E   G ++D+VLPI  L  AT+  MI +GA+ L+  
Sbjct: 241 KLWDES------KGRPIGLDMESPEDSNGGMIDMVLPIFTLTAATVYFMIDSGAAVLSAQ 294

Query: 301 GQSFDIFGAFENTNVGTSLVYGGLVGLAMAFVTVLRQKLPTAEIAKTLWIGAKSMFGAIL 360
           G  F + G+FENTNVG+SLVYG L  L ++    LR KL      K    G  +M  AI 
Sbjct: 295 GLPFSVLGSFENTNVGSSLVYGALCSLGVSIALALRLKLGAKNWIKAAPQGVMAMLPAIN 354

Query: 361 ILIFAWTIGSVIGDMKTGAYLSSLVQGNIDPHWLPVILFVLSGAMAFSTGTSWGTFGIML 420
           IL+FAW IG+V+ D++TG YL+SL  GN+    LP ++FVLS AMAF+TGTSWGTFGIML
Sbjct: 355 ILLFAWAIGAVVRDVETGKYLASLANGNLPIEVLPAVVFVLSCAMAFATGTSWGTFGIML 414

Query: 421 PIAGDMAGATDIALMLPMLGAVLAGSVFGDHCSPISDTTILSSTGARCHHIDHVATQLPY 480
           P+AGDMA A+DI+LMLPML AVLAGSVFGDH SPIS T+ILS+TGA CHHIDHV TQLPY
Sbjct: 415 PLAGDMAAASDISLMLPMLAAVLAGSVFGDHSSPISSTSILSATGAGCHHIDHVMTQLPY 474

Query: 481 ALAVALVSAIGYVVLGIFASLGLALAAASVSFVVVCLIFAA--LSKAKVSKQVSA 533
           ALA+A  +A+GY+ +G   S    +  +++ F+    +F+A  L KAK  + +++
Sbjct: 475 ALAMAFGAALGYLAMGFMHSTLAGVCVSALWFI----LFSAYHLQKAKTRQALAS 525