Pairwise Alignments

Query, 533 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 507 a.a., hypothetical Na+/H+ antiporter (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  304 bits (779), Expect = 5e-87
 Identities = 171/491 (34%), Positives = 281/491 (57%), Gaps = 24/491 (4%)

Query: 8   SSPLSVLPPLVALSLAIVTRRVLLSLGVGIFLGALLLADYSIGQSLQYIATQVGSVFVKE 67
           S+ L++LP  + L LA+  RR L++LGVGI  GAL++A + I QS+ Y+       F  +
Sbjct: 3   SNLLAILPLFLTLVLALWLRRTLVALGVGILSGALIIAHFDIVQSVSYLLEIGVKQFYSQ 62

Query: 68  GAINAWNMSIVGFLLLLGMMTALLTLSGGTRAFAQWAQVRVKSKRGSKLLAAFLGVFIFV 127
            A   W+++++  +LLLG MT LL  SG    F  W   R+++ R +++    LG  +F+
Sbjct: 63  DAWQWWHLNVLTAMLLLGSMTQLLARSGAVGLFGDWLYRRIRTGRQARVGVVLLGWLVFI 122

Query: 128 DDYFNSLAVGSISRPVTDRFYVSRAKLAYILDSTAAPMCVVMPASSWGAYIMTIIGGILV 187
           D  F+ LAVG + +P++ R+ + + +LAY++DS A+P+C ++P SSWG Y+M ++ G+  
Sbjct: 123 DGIFSCLAVGHVCQPLSQRYGIRQEQLAYLVDSNASPLCSLLPFSSWGPYVMALLAGL-- 180

Query: 188 SHGIEEYSALGAYLRLVPMNFYAIFALLMVFAVVWFQMDIGQMRKHEIAASQGRGFDEDP 247
                  SAL A++ +   NFYAI  L +   V WF +    +    + A++       P
Sbjct: 181 --SFLPVSALEAFIEVALSNFYAITTLGLSLIVAWFGVGFRPIESAVLMAAE-------P 231

Query: 248 STDTQEAHELNEELDIRE-SERGTVLDLVLPIVFLVVATIGAMIWTGASALAESGQSFDI 306
           S  TQ        +DI   S +G    L +P++ L+ A++G  +W+GA  +     ++DI
Sbjct: 232 SKVTQ--------MDIAPPSSQGNPWLLAIPMLTLLCASVGLTLWSGAQQVP----AWDI 279

Query: 307 FGAFENTNVGTSLVYGGLVGLAMAFVTVLRQKLPTAEIAKTLWIGAKSMFGAILILIFAW 366
                + ++G ++    L+   +    ++       ++   L  G + +  AI IL+  W
Sbjct: 280 SAWLASADIGAAMRDACLLSTLVTLGLLIMSGRSIGKLLGDLAHGVRMIAFAIAILLCTW 339

Query: 367 TIGSVIGDMKTGAYLSSLVQGNIDPHWLPVILFVLSGAMAFSTGTSWGTFGIMLPIAGDM 426
            IG+VI D+   + L+   +  + P  L   +F+L   MAF+TG+SWGTF IM+PI G++
Sbjct: 340 MIGAVIQDLGVASLLADWAKWYLSPSLLVAGMFLLCAIMAFATGSSWGTFAIMIPIGGEI 399

Query: 427 AGATDIALMLPMLGAVLAGSVFGDHCSPISDTTILSSTGARCHHIDHVATQLPYALAVAL 486
           A   D +L+LP+L AV+AGSVFGDHCSPISDT++LS+T + C   DHV TQLP+AL  A 
Sbjct: 400 AHNMDASLLLPVLSAVMAGSVFGDHCSPISDTSVLSATSSGCLPHDHVVTQLPFALIAAF 459

Query: 487 VSAIGYVVLGI 497
            + +G+ ++ +
Sbjct: 460 AALVGFQLVNL 470