Pairwise Alignments

Query, 533 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., Na+/H+ antiporter NhaC (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 58.2 bits (139), Expect = 7e-13
 Identities = 48/173 (27%), Positives = 83/173 (47%), Gaps = 10/173 (5%)

Query: 351 GAKSMFGAILILI-FAWTIGSVIGDMKTGAYLSSLVQGN---IDPHWLPVILFVLSGAMA 406
           G  S  G I I +     +G +I        + +++      I P+   V   +L    +
Sbjct: 64  GMLSAVGRIQIAVAILMLVGMIIAAWMASGTIPTIIYWGLKLIAPNHFLVSTIILCAVAS 123

Query: 407 FSTGTSWGTFG-IMLPIAG-DMAGATDIALMLPMLGAVLAGSVFGDHCSPISDTTILSST 464
            +TGTS+GT G I + + G   A   D A  +   GA+++G+ FGD  SP+SD+T +++ 
Sbjct: 124 LATGTSFGTMGTIGVALLGVGTAMGYDPAWTV---GAIVSGAYFGDKMSPVSDSTNIAAA 180

Query: 465 GARCHHIDHVATQLPYALAVALVSAIGYVVLGIFASLGLALAAASVSFVVVCL 517
                   H+A+ L   L   +VS IGY +LG   + G A +  +++ ++  L
Sbjct: 181 VCEVPLFTHIASMLWTTLPALVVSIIGYAILGSMHT-GTAESVGNINTILTTL 232



 Score = 28.5 bits (62), Expect = 6e-04
 Identities = 52/244 (21%), Positives = 96/244 (39%), Gaps = 32/244 (13%)

Query: 275 VLPIVFLVVA------TIGAMIWTGASALAESG--QSFDIFGAFENTNVGTSLVYGGLVG 326
           +L +V +++A      TI  +I+ G   +A +    S  I  A  +   GTS    G +G
Sbjct: 78  ILMLVGMIIAAWMASGTIPTIIYWGLKLIAPNHFLVSTIILCAVASLATGTSFGTMGTIG 137

Query: 327 LAMAFVTVLRQKLPTAEIAKTLWIGAKSMFGAILILIFAWT-IGSVIGDMKTGAYLSSLV 385
           +A+  V       P   +     I + + FG  +  +   T I + + ++    +++S++
Sbjct: 138 VALLGVGTAMGYDPAWTVGA---IVSGAYFGDKMSPVSDSTNIAAAVCEVPLFTHIASML 194

Query: 386 QGNIDPHWLPVILFVLSGAMAFSTGTSWGTFGIMLPIAGDMAGATDIALMLPMLGAVLAG 445
              +    + +I + + G+M   T  S G    +L         + +AL+ P+L  VLA 
Sbjct: 195 WTTLPALVVSIIGYAILGSMHTGTAESVGNINTILTTLEGSFSLSPVALIPPVLMIVLAY 254

Query: 446 SVFGDHCSPISDTTILSSTGARCHHIDHVATQLPYALAVALVSAIGYVVLGIFASLGLAL 505
                   P+    ++S                  ALA+AL   +  V L  F + G   
Sbjct: 255 KRL--PVLPVMVVCVVS------------------ALAIALFEGVSVVNLAKFLTTGYKA 294

Query: 506 AAAS 509
           A  S
Sbjct: 295 ATPS 298



 Score = 28.1 bits (61), Expect = 7e-04
 Identities = 29/123 (23%), Positives = 51/123 (41%), Gaps = 30/123 (24%)

Query: 413 WGTFGIMLPIAGDMAGATDIALMLPMLGAVLAGSVFGDHCSPIS------DTTILSSTGA 466
           W  F  ++P+A  + G   +A+  P+L  ++A  V G  C  I          +LS+ G 
Sbjct: 12  WAVFTFIVPVAIILYGTVVVAVRPPVLPLLVAVVVAGAMCLRIGYSWEELQEGMLSAVGR 71

Query: 467 RCHHIDHVATQLPYALAVALVSAIGYVVLGIFAS--------LGLALAAAS---VSFVVV 515
                          +AVA++  +G ++    AS         GL L A +   VS +++
Sbjct: 72  -------------IQIAVAILMLVGMIIAAWMASGTIPTIIYWGLKLIAPNHFLVSTIIL 118

Query: 516 CLI 518
           C +
Sbjct: 119 CAV 121