Pairwise Alignments

Query, 533 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., putative Na+/H+ antiporter (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 58.2 bits (139), Expect = 6e-13
 Identities = 39/110 (35%), Positives = 59/110 (53%), Gaps = 7/110 (6%)

Query: 398 LFVLSGAMAFSTGTSWGTFGIMLPIAGDMAGATDIALMLPMLGAVLAGSVFGDHCSPISD 457
           +F+ +  ++ S GTS GT   + P+A  +A  T+IAL   M+  V+ GS FGD+ S ISD
Sbjct: 121 IFIAACFISLSIGTSVGTIVALTPVAVGLAEKTEIALPF-MVAVVVGGSFFGDNLSFISD 179

Query: 458 TTILSSTGARCHHIDHVATQLPYALAVALVSAIGYVVLGIFASLGLALAA 507
           TTI S+    C   D       + +   +V     +VLGI+   GL++ A
Sbjct: 180 TTIASTKTQECVMRD------KFRVNSMIVVPAAIIVLGIYIFQGLSITA 223



 Score = 48.9 bits (115), Expect = 4e-10
 Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 24/211 (11%)

Query: 11  LSVLPPLVALSLAIVTRRVLLSLGVGIFLGALLLADYSIGQSLQYIATQVGSVFVKEGAI 70
           + V+P ++ L  AI    V+L L +GI    ++            IAT    VF   GA+
Sbjct: 233 IKVIPYIIVLGTAIAGMNVMLVLIIGILTSGII-----------GIATGSFDVFDWFGAM 281

Query: 71  NAWNMS---IVGFLLLLGMMTALLTLSGGTRAFAQWAQVRVKSKRGSKLLAAFLGVFIFV 127
                    ++   LL G M   +  +GG     +     V SKRG++L  A L     +
Sbjct: 282 GTGITGMGELIIITLLAGGMLETIRYNGGIDFIIKKLTRHVNSKRGAELSIAALVSIANL 341

Query: 128 DDYFNSLAV---GSISRPVTDRFYVSRAKLAYILDSTAAPMCVVMPASSWGAYIMTIIGG 184
               N++A+   G I++ +  RF++ R K A ILD+ +   C++     +GA  M I  G
Sbjct: 342 CTANNTIAIITTGPIAKDIAKRFHLDRRKTASILDTFS---CLIQGIIPYGAQ-MLIAAG 397

Query: 185 ILVSHGIEEYSALGAYLRLVPMNFYAIFALL 215
           +     I   S +G       M   A+ A+L
Sbjct: 398 LA---NISPISIIGNLYYPFTMGVCALLAIL 425