Pairwise Alignments

Query, 533 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 501 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella sp. ANA-3

 Score =  309 bits (792), Expect = 1e-88
 Identities = 175/487 (35%), Positives = 277/487 (56%), Gaps = 28/487 (5%)

Query: 11  LSVLPPLVALSLAIVTRRVLLSLGVGIFLGALLLADYSIGQSLQYIATQVGSVFVKEGAI 70
           L++LP L+ L LA+  RR L++LGVGI  GAL++A + I QSL Y+       F  + A 
Sbjct: 6   LAILPLLLTLVLALWLRRTLVALGVGILSGALIIAQFDILQSLGYLLEIGAKQFYSQDAW 65

Query: 71  NAWNMSIVGFLLLLGMMTALLTLSGGTRAFAQWAQVRVKSKRGSKLLAAFLGVFIFVDDY 130
             W+++++  +LLLG MT LL  SG    F  W   R+++ R +++    LG  +F+D  
Sbjct: 66  QWWHLNVLMAMLLLGSMTQLLARSGAVEQFGDWLYRRIRTGRQARIGVVLLGWLVFIDGI 125

Query: 131 FNSLAVGSISRPVTDRFYVSRAKLAYILDSTAAPMCVVMPASSWGAYIMTIIGGILVSHG 190
           F+ LAVG + +P++ R+ + + +LAY++DS A+P+C ++P SSWG Y+M ++ G+     
Sbjct: 126 FSCLAVGHVCQPLSQRYGIRQTQLAYLVDSNASPLCSLLPFSSWGPYVMALLAGL----S 181

Query: 191 IEEYSALGAYLRLVPMNFYAIFALLMVFAVVWFQMDIGQMRKHEIAASQGRGFDEDPSTD 250
               SAL A++ +   NFYAI  L +   V WF M    + K  +AA        +PS  
Sbjct: 182 FLPVSALEAFIDVALSNFYAITTLGLSLIVAWFGMGFSSIEKALLAAEP-----VEPSLS 236

Query: 251 TQEAHELNEELDIRESERGTVLDLVLPIVFLVVATIGAMIWTGASALAESGQSFDIFGAF 310
                          S +G    L +P++ L+ A++G  +W+GA  +     S+DI    
Sbjct: 237 ---------------SSKGNPWLLAIPMLTLLGASVGLTLWSGAQQVP----SWDISAWL 277

Query: 311 ENTNVGTSLVYGGLVGLAMAFVTVLRQKLPTAEIAKTLWIGAKSMFGAILILIFAWTIGS 370
              ++G ++    L+   +  V ++       ++   L  G + +  AI IL+  W IG+
Sbjct: 278 AKADIGAAMRDACLLSTLVTLVLLMLSGRSIGKLLGDLAHGVRMIAFAIAILLCTWMIGA 337

Query: 371 VIGDMKTGAYLSSLVQGNIDPHWLPVILFVLSGAMAFSTGTSWGTFGIMLPIAGDMAGAT 430
           VI D+   + L+S  +  + P  L   +F+L   MAF+TG+SWGTF IMLPI G++A   
Sbjct: 338 VIQDLGVASLLASWAKLYLSPSLLVAGMFLLCAIMAFATGSSWGTFAIMLPIGGEIAHNM 397

Query: 431 DIALMLPMLGAVLAGSVFGDHCSPISDTTILSSTGARCHHIDHVATQLPYALAVALVSAI 490
           D +L+LP+L AV+AGSVFGDHCSPISDT++LS+T + C   DHV TQLP+AL  A  + +
Sbjct: 398 DASLLLPVLSAVMAGSVFGDHCSPISDTSVLSATSSGCLPHDHVVTQLPFALIGAGAALV 457

Query: 491 GYVVLGI 497
           G+ ++ +
Sbjct: 458 GFQLVNL 464