Pairwise Alignments

Query, 533 a.a., Na+/H+ antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 522 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella sp. ANA-3

 Score =  565 bits (1457), Expect = e-165
 Identities = 286/528 (54%), Positives = 380/528 (71%), Gaps = 8/528 (1%)

Query: 1   MNLIDFASSPLSVLPPLVALSLAIVTRRVLLSLGVGIFLGALLLADYSIGQSLQYIATQV 60
           M ++ +A S LS+LPP+VA+ LAI TRRVLLSLG+GI +G LLL  +S   S +++   V
Sbjct: 1   MTVVSYADSALSLLPPVVAIVLAIFTRRVLLSLGLGIVIGVLLLNQFSPVASGEFLFNSV 60

Query: 61  GSVFVKEGAINAWNMSIVGFLLLLGMMTALLTLSGGTRAFAQWAQVRVKSKRGSKLLAAF 120
             +F  E  +N+WN+ I+GFL++LGM+TAL+T+SG  RAFA WA++ +++KR +KLL  F
Sbjct: 61  KGLFWSEDGVNSWNLYILGFLIVLGMITALITVSGSARAFADWARLHIRNKRDAKLLTMF 120

Query: 121 LGVFIFVDDYFNSLAVGSISRPVTDRFYVSRAKLAYILDSTAAPMCVVMPASSWGAYIMT 180
           LG  +F+DDYFNSL VGS++RPVTDR+Y+SRAKLAY+LDSTAAP+CV+ P SSWGAYI+ 
Sbjct: 121 LGCVVFIDDYFNSLVVGSVARPVTDRYYISRAKLAYLLDSTAAPVCVISPVSSWGAYIIA 180

Query: 181 IIGGILVSHGIEEYSALGAYLRLVPMNFYAIFALLMVFAVVWFQMDIGQMRKHEIAASQG 240
           +IGGIL +HG  +   L  +++++PMNFYAIF+LL++  V +  +DIG MR+HE+ A +G
Sbjct: 181 LIGGILTAHGFADSGHLSVFIQMIPMNFYAIFSLLLLLCVAFMGLDIGPMREHELNAQRG 240

Query: 241 RGFDEDPSTDTQEAHELNEELDIRESERGTVLDLVLPIVFLVVATIGAMIWTGASALAES 300
             +DE+               D+ E+E G +L L LPI  LV AT+  M+ +GA  L + 
Sbjct: 241 NLYDENKGLPP------GANADLPEAETGKILGLFLPITVLVFATLYFMVDSGAQVLTKE 294

Query: 301 GQSFDIFGAFENTNVGTSLVYGGLVGLAMAFVTVLRQKLPTAEIAKTLWIGAKSMFGAIL 360
           G  F+I  AFE T+V +SL +G L+GLA+A V  L Q +  + + K +  GA+SM  AI 
Sbjct: 295 GIEFNIISAFEKTDVSSSLFFGALIGLAVALVLNLVQGVEKSMVVKGVVQGARSMLPAIY 354

Query: 361 ILIFAWTIGSVIGDMKTGAYLSSLVQGNIDPHWLPVILFVLSGAMAFSTGTSWGTFGIML 420
           IL+FAWTI  VIG ++TG +++SL  GNI   +LP ++FVL+G  AFSTGTSWGTFGIML
Sbjct: 355 ILLFAWTIAGVIGQLETGKFMASLATGNIPFAFLPALMFVLAGLTAFSTGTSWGTFGIML 414

Query: 421 PIAGDMAGATDIALMLPMLGAVLAGSVFGDHCSPISDTTILSSTGARCHHIDHVATQLPY 480
           PIA DMA  +  A+MLPML +VLAG+VFGDHCSPISDTTILSSTGA CHHIDHV TQLPY
Sbjct: 415 PIAADMAMGSHTAMMLPMLASVLAGAVFGDHCSPISDTTILSSTGASCHHIDHVVTQLPY 474

Query: 481 ALAVALVSAIGYVVLGIFASLGLALAAASVSFV--VVCLIFAALSKAK 526
           A+ VAL+S +GYVVLG   S+   L    V FV  +V L F + S AK
Sbjct: 475 AVIVALISMVGYVVLGFTESVNAGLLTCGVLFVLSIVWLRFKSQSNAK 522